Rhodococcus sp. M8: ISO16_00845
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Entry
ISO16_00845 CDS
T11421
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISO16_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhmm03019
]
ISO16_00845
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_00845
Enzymes [BR:
rhmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ISO16_00845
Messenger RNA biogenesis [BR:
rhmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ISO16_00845
DNA repair and recombination proteins [BR:
rhmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ISO16_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPG45680
LinkDB
All DBs
Position
complement(184527..186629)
Genome browser
AA seq
700 aa
AA seq
DB search
MSTATTDLRDEAERLLRDLAGPGARLREDQWSAIEALVVHRRRALVVQRTGWGKSAVYFI
SAKLLRAHGHGPTVIVSPLLALMRNQVESAQRAGVRAATINSGNVTEWEEIHRQVAEGAV
DVLLVSPERLNNPDFRDQVLPALARDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLVTEIG
EGIPVLATTATANDRVVADVAAQLGVGEGTGETLVLRGGLDRPSLHLSVLRIDEPARRAA
WLAQHLDELPGSGIVYTLTVSAAHDLAALLSEHGHTVAAYTGQSDPAEREQLEADLLANR
VKALIATSALGMGFDKPDLGFVVHLGAPSSPISYYQQVGRAGRATERAEVILLPGPEDRQ
IWSWFASVAFPGEEVVRRVIEVLEPERPQSTQALEPLVDLNRSRLEMVLKVLDVDGAVRR
VKGGWIATGVPWEYDAARYATLERAREAEQEAMLEYERTTRCRMVFLRTQLDDPDLTSDT
PGCGRCDNCCGARWPADVDDTELGRVRARLDRPGVDLPPRRQWPTGMAKLGVTLSGKITD
GPEPGRVLGRLSDLGWGPRLRALLDGPDAPVPDAVVQAAVAVLKAWDWSDRPTAVMAVES
ATHPRLVGSLAARLAQLGRLEDLGVLRARPGRPPVTAANSAYRIAGLVDAWESPDLRGNR
GPILLVDAVTDTGWTMTMAARTLIRAGASAVLPLALASPK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccaccacggatctgcgcgacgaggccgaacgactgctccgcgacctggcg
ggacccggcgcccggttgcgggaggaccagtggagcgccatcgaggcactggtggtgcat
cgccggcgagcgctggtcgtgcagcgcacgggctggggcaagtcggccgtctacttcatc
tccgccaagctgctccgcgcccacgggcacgggccgaccgtgatcgtctccccgctcctg
gccctgatgcgtaaccaggtcgagtcggcgcagcgcgcgggcgtccgcgcggccacgatc
aattccggcaacgtcaccgagtgggaggagatccaccggcaggtcgccgagggcgcggtg
gacgtcctgctcgtcagcccggagcggctcaacaacccggacttccgcgaccaggtgctg
ccggcgctcgcccgcgacgccggactggtggtggtcgacgaggcgcactgcgtctcggac
tggggacacgacttccggccggactaccggcgcatccgcaccctcgtcaccgaaatcggc
gagggcattccggtgctcgcgaccaccgcgaccgcgaacgaccgggtcgtggcggacgtg
gccgcgcagctcggcgtcggggagggcacgggcgagaccctggtgctgcgcggtggtctc
gaccggccgtcgctgcacctgtcagtgctgcggatcgacgagcccgcgcgccgggcggcg
tggctcgcccagcacctcgacgagctgcccggttccgggatcgtctacaccctcaccgtg
tcggccgcgcacgacctggccgcgctgctctccgagcacggtcacaccgtcgcggcgtac
acggggcagtccgatccggccgagcgggagcagctggaggcggacctcctcgccaaccgg
gtcaaggccctgatcgccacctcggccctgggcatgggtttcgacaagccggacctcggg
ttcgtggtgcacctgggagcaccgtcctcacccatctcctactaccagcaggtcggtcgc
gcgggccgtgcgaccgagcgggcggaggtgatcctgcttccgggccccgaggaccggcag
atctggagctggttcgcgtcggtggccttcccgggggaggaggtggtgcggcgggtgatc
gaggtgctcgagccggagcggccgcagtccacgcaggccctcgagccgttggtcgacctc
aaccggtcccggctggagatggtgctcaaggtgctcgacgtggacggtgcggtacgccgg
gtgaagggcggctggatcgccaccggcgtgccctgggagtacgacgccgcccggtacgcg
acgctcgagcgggcccgcgaggccgagcaggaggcgatgctcgagtacgagcggaccacc
cggtgccggatggtgttcctgcgcacccagctcgacgatcccgacctgacgtccgacacc
ccgggctgcgggcggtgcgacaactgctgcggggcgcggtggcccgcggacgtcgacgac
accgagctgggccgggtgcgggcccggctggaccggccgggggtggacctgccgccgcgg
cggcagtggccgacggggatggccaagctcggcgtgacactgtccgggaagatcaccgac
gggcccgagccgggccgggtactcggccggctgtcggacctcggatggggtccgcggctg
cgggcgctgctggacggccccgatgcgccggtgcccgacgcggtggtgcaggccgccgtg
gcggtgctcaaggcgtgggactggtcggatcgcccgaccgcggtgatggccgtggagtcg
gcgacccatcctcgcctggtcggttccctggcggcgcggctggcgcagctcggccggctc
gaggatctcggcgtgctgcgtgcccggcccggccggcccccggtgacggcagcgaactcg
gcgtaccggatcgccggcctcgtggacgcgtgggagagccccgacctccgcgggaaccgg
ggaccgatcctgctcgtcgacgcggtcaccgacaccggctggacgatgacgatggcggcg
cggaccctgatccgggccggggcctccgcggtgctgccgctggcgctggcgagcccgaaa
taa
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