Rhodococcus sp. M8: ISO16_00870
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Entry
ISO16_00870 CDS
T11421
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ISO16_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_00870
Enzymes [BR:
rhmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ISO16_00870
DNA repair and recombination proteins [BR:
rhmm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ISO16_00870
Prokaryotic type
ISO16_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPG45684
LinkDB
All DBs
Position
190894..191571
Genome browser
AA seq
225 aa
AA seq
DB search
MAVRPLPEIVEEGWARALAPVAADIAAMGDFLRAENAAGRGYLPSGANVLRAFTQPFDRV
KVLIVGQDPYPTPGHAVGLSFSVAPEVRPVPRSLANIYREYSDDLGLPTPPNGDLTPWSA
QGVLLLNRVLTVQPGQPASHRGKGWESVTEQAIRALVARTAPLVAILWGRDAATLEPMLG
DVPTVKSAHPSPLSASRGFFGSRPFSRANALLTEQGGDPVDWRLA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacgacccctgccggagatcgtcgaggaaggctgggcgcgggcgctggctccc
gttgccgccgacatcgcggcgatgggcgacttcctgcgcgccgagaacgccgccggacgc
ggctacctgccctccggcgcgaacgtgctgcgggccttcacccagccgttcgaccgggtg
aaggtgctcatcgtcggccaggacccgtatccgacgccgggtcatgccgtcggactgagc
ttctcggtcgcgccggaggtgcgtccggtgccgcgcagcctggccaacatctaccgcgaa
tacagcgacgacctcggcctgccgacaccacccaacggcgacctcacaccgtggtcggcg
cagggggtgctgctgctcaaccgcgtcctgacggtgcaacccggccagccggcgtcgcat
cggggcaagggctgggagagcgtgaccgagcaggcgatccgggcgctcgtcgcccgcacc
gcgccgctcgtcgcgatcctgtggggccgcgacgcggccaccctcgaaccgatgctcggc
gacgtgcccaccgtgaagtcggcgcacccgtcgccgctgtcggcctcccgcgggttcttc
gggtcccgccccttcagccgcgcgaacgcgctgctgaccgagcagggcggggacccggtg
gactggcgcctggcctga
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