Rhizobium sp. N1341: AMJ98_CH00129
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Entry
AMJ98_CH00129 CDS
T04420
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03030
DNA replication
rhn03430
Mismatch repair
rhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMJ98_CH00129 (dnaX)
03430 Mismatch repair
AMJ98_CH00129 (dnaX)
03440 Homologous recombination
AMJ98_CH00129 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhn03032
]
AMJ98_CH00129 (dnaX)
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH00129 (dnaX)
Enzymes [BR:
rhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMJ98_CH00129 (dnaX)
DNA replication proteins [BR:
rhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMJ98_CH00129 (dnaX)
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMJ98_CH00129 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
AAA_19
AAA_24
RuvB_N
AAA_18
TsaE
SKI
SRP54
AAA_assoc_2
DUF815
Rad17
CbiA
AAA_2
nSTAND3
AAA_28
RNA_helicase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ANL07864
LinkDB
All DBs
Position
complement(138049..139914)
Genome browser
AA seq
621 aa
AA seq
DB search
MSDTERQSKDAASTGTGYRVLARKYRPKDFTDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTAEIDKPTIDLRVPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISASDLVGLFTTIAAKEGIEAEGDALAMIARAAEGSARDGLSL
LDQAIAHGAGAVQAETVRGMLGLADRARIVDLFQHVVKGDVAAALGEFQNQYEAGANPVV
VLTDLADFTHLVTRLKYVPDAANDPSLSEVERTKAAEFAKGVAVTTLSRIWQMLLKGIPE
TEGSSRTAGAAEMVLIRLAHAAHLPAPEDAARRLAEFSGDNAGQRPSSPSGNGGGNGTRV
PYQSSVTARATEPTPRPQPSGPTAMLRAVPNPEPQNIGRTETRPAEAPKPLVRVNSIADI
VDLATEKRDVKLKALVRNFVRPVRLEPGRLDVNLTEGAPNTLLNELAVKLKEWTGIHWIV
STSREEGGPTMVEAEAKAQEQRVSDARQDPDVAAILAHFPGAKIIDVRVRAPEPEEEGEA
KAPAAAESEEGDILPGDDIEF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgagcgacaatcaaaagatgccgcctcgacgggcaccggataccgggtg
ctggctcgcaaataccgccccaaggatttcacggacctgatggtcggccaggagccgatg
gtccgcacgcttaccaacgccttcgagaccggccgcatcgcgcaggcctatatgctgacc
ggcgtgcgcggcgtcggcaagacgacgacggcgcgcatcctggcgcgagcgctgaattac
aagacggcagaaatcgacaagccgacgattgatctgcgcgtgcccggcgaacattgccag
gcgatcatggaaggccggcatgtcgatgtgatcgaaatggatgccgcctcgcatacgggt
atcgacgatataagagagatcatcgagcaagtgcgctatcggccggtttcggcgcgctac
aaggtctatatcatcgacgaagtgcacatgctctcgacacaggccttcaacggcctgttg
aagacgctggaagagccgccggaacatgtgaagttcatcttcgccaccactgaaatccgc
aaggtgccgatcaccgtgctgtcgcgctgccagcgcttcgacctgcgccgcatcagcgcg
tcggatctcgtcgggctgttcacgacaatcgcggccaaggagggcatcgaggcggaaggc
gacgcactggcaatgatcgcgcgcgccgccgaaggctcagcgcgcgacggcttgtcgctg
ctcgaccaggcgatcgcccatggcgccggcgccgtgcaggcggaaaccgtgcggggcatg
ctcggccttgccgaccgcgcccggatcgtcgatctcttccagcatgtcgtcaaaggcgat
gtcgcagctgccctcggcgaattccagaaccagtacgaggccggcgccaatccggtggtg
gtgctgaccgatcttgccgatttcacccatctggtgacgcggctgaaatatgtgccggat
gcggcaaacgacccctcgctcagcgaagtcgagcgcaccaaggcggcggaattcgccaag
ggcgtcgcggtgacgacgctgtcgcgcatctggcagatgctgctgaagggcattcccgaa
acggaaggctcgtcgcgcacggcgggtgcagccgaaatggtgctgatccggcttgcgcat
gcggcgcatctgccggcgcccgaggatgcggcgcggaggcttgcggagttttccggcgac
aatgccggccagcggccctcctcgccctcgggcaatggcggcggcaacggaacgcgggtt
ccctatcaaagcagtgtcacggcacgtgcgacggagccaacaccacggccgcagccctct
gggccgaccgccatgttgcgcgccgtgcccaatccggagccacagaatatcggccgcacc
gagaccaggcccgcagaggcgccgaagccgctcgtgcgtgtcaattccatcgccgatatc
gtcgaccttgcgaccgagaagcgcgacgtcaagctgaaggcactggtgcgcaacttcgtg
cggccggtgcgtctcgagcccggccggcttgatgtgaacctgaccgaaggcgctccgaat
acgctgctcaacgagctcgccgtcaagctcaaggaatggaccggaatccactggatcgtc
agcaccagccgcgaagaaggcgggccgacgatggtggaagcggaagccaaggcgcaggag
cagcgcgtcagcgatgcgaggcaggatcctgatgtggcggcgatcctggcgcattttccc
ggcgcaaaaatcatcgacgttcgcgtgcgggcgccggaaccggaagaggaaggcgaggcc
aaagcgccggccgccgccgaatccgaagaaggcgacattctgcccggcgacgacatagaa
ttctga
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