KEGG   Rhizobium sp. N1341: AMJ98_PC00235
Entry
AMJ98_PC00235     CDS       T04420                                 
Name
(GenBank) type VI secretion system DotU/OmpA/MotB outer membrane protein
  KO
K11892  type VI secretion system protein ImpK
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AMJ98_PC00235
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhn02044]
    AMJ98_PC00235
Secretion system [BR:rhn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AMJ98_PC00235
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: ANL12598
LinkDB
Position
pRspN1341c:259584..260873
AA seq 429 aa
MVVIEETMPKSQPLVLLHAEEQLAVPSPSSPVADELTWEMLALDRLNPLVAAAAALLGLS
AQLKSSASHIDVEALRLRVLREIDAFERRITPLGLPSRAIKVCKYALCATIDDIVLNTAW
GSNSVWTTRSLVGSLFSDTWGGERFFDLLTQLKNEPAINIELLELLYYCMRLGFEGRYRV
TAGGAAELSVLCEDVYRLIRAARGDFERELSPHWRRNSNNPKPRRTIVPIWAVVAFGAGL
LLSIYTGLLHALNARADAVFNDIATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIRE
GLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAI
PVQSLAFPSNDSLSLARASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRR
IQIIITKTQ
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggtggtgattgaggaaacgatgccaaaatcccagccactcgtcctccttcacgccgag
gagcagttggctgtcccttcgccgtcatcgccagtggcggacgaacttacctgggagatg
cttgcgctcgaccgacttaatccactggtcgcggccgcggcggcgctgctgggtctcagc
gctcagctcaagagcagtgctagccatatcgacgttgaagcactgcgccttagggtgctg
cgggagatcgatgcttttgagcgtcggatcacgccgctcggattgccctcgcgagcgatc
aaggtctgcaaatacgccctctgcgcgaccatcgatgacatcgttctgaacacagcctgg
ggcagcaacagcgtctggacgacgcgcagcttggtgggatcgctgttcagcgatacctgg
ggcggcgagcgcttcttcgatctgctgacgcaattgaaaaatgaaccggccatcaatata
gaactgctggagctgctctactactgcatgaggttgggcttcgaaggccgctaccgcgtc
actgcgggaggagccgcagagctcagtgtgctgtgcgaagacgtctaccgcctgatccga
gcagcccgtggtgacttcgagcgcgaactatccccgcactggcggaggaactcaaataat
ccgaagccacgccgcacaatcgttccaatctgggccgtcgtagcgtttggggcaggatta
ctcctctcgatctataccggactcctgcatgcattaaatgcccgcgccgacgctgtcttc
aacgatatcgcgacattgccgccgaacggcgttgtcagatcggcgagaatcgcattgcca
ccaaaggttgttatgagcagcgaccgactgcgtaacttcctcgagcccgaaatccgcgaa
gggcttgtcactgtgtccgaggacccacagcagatcgtcgttatcattcgcgcctccggg
atgttcgattctgctagtccggaagtgaagaaaatgttcctgccgcttcttttacgaatt
ggtcgttctctgaacggtgagtcgggatcggtcctcctgaccgggcacaccgacgccatt
ccggtgcaatcactcgccttcccttcaaacgattccctttcgctcgcgcgtgcgagcgca
gctgccgagattatcaaatccatgatggatgacccaggccgcgtgcgagaagagggcaga
gggagcggagaaccggtcgcttcgaaccacacgcccgagggccgcgcgcggaaccgtcgg
attcaaatcatcatcacaaagacacaatga

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