KEGG   Rhodococcus sp. JVH1: JVH1_04090
Entry
JVH1_04090        CDS       T10360                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rhoj  Rhodococcus sp. JVH1
Pathway
rhoj00230  Purine metabolism
rhoj00240  Pyrimidine metabolism
rhoj01100  Metabolic pathways
rhoj01232  Nucleotide metabolism
Module
rhoj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rhoj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rhoj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    JVH1_04090 (nrdE)
   00240 Pyrimidine metabolism
    JVH1_04090 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhoj03400]
    JVH1_04090 (nrdE)
Enzymes [BR:rhoj01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     JVH1_04090 (nrdE)
DNA repair and recombination proteins [BR:rhoj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    JVH1_04090 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: XEM93746
LinkDB
Position
1:complement(865200..867281)
AA seq 693 aa
MLNLYGPNGEIQFDKDVAAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDQYS
RAFVKSLIDHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD
EELATKLVDEIIAGRFQPATPTFLNSGKKQRGEPVSCFLLRIEDNMESIGRSINSALQLS
KRGGGVALLLSNVREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHA
HHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGVP
FADVNVTEKYYEMVDDKRIRKSKIKAREFFQTIAELQFESGYPYIMFEDTVNRANPIEGK
ITHSNLCSEILQVSTPSLFNDDLSYSEVGKDISCNLGSLNIAKTMDSPDFARTIEVSIRA
LTAVSDQTHIYSVPSIEQGNNDSHAIGLGQMNLHGYLARERIYYGSDEGIDFTNIYFYTV
VFHAVRASNRIAIERGTHFKGFPQSKYASGEYFDKYTDQVWEPKTERVRQLFAESGVHIP
TQDDWRELKASVQKYGIYNQNLQAVPPTGSISYINYSTSSIHPVASKIEIRKEGKIGRVY
YPAPYLTNDNLEYYQDAYEIGYEKIVDTYAAATQHVDQGLSLTLFFKDTATTRDINKAQI
YAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgctcaacctgtacggccccaacggtgagatccagttcgacaaggacgtcgccgccgcc
cgccagtacttcctgcagcacgtcaaccagaacaccgtcttcttccacaacctggacgag
aagctcgactacctcgtggaggagaactactacgagcccgaggtcctcgaccagtactcg
cgcgcgttcgtgaagtcgctgatcgatcacgcctacgccaagaagttccgcttcccgacg
ttcctgggcgcgttcaagtactacacctcgtacacgctgaagacgttcgacggcaagcgc
tacctggagcggttcgaggaccgtgtctgcatggtcgcgctcacgctcgccgccggcgac
gaagagctggcgaccaagctcgtcgacgagatcattgccggccggtttcagcccgccacc
cccacgttcctcaactccggcaagaagcagcgcggcgagcccgtgtcctgcttcctgctg
cgtatcgaggacaacatggagtcgatcggccgctccatcaactccgccctgcagctgtcc
aagcgcggcggcggagttgcgttgctgctcagcaacgttcgcgagcacggtgccccgatc
aagaagatcgagaaccagagctccggtgtcatcccgatcatgaagctgctcgaggattcc
ttctcgtacgccaaccagctcggcgcgcgtcagggcgcgggcgcggtgtacctgcacgcg
caccacccggacatctaccgcttcctcgacaccaagcgggagaacgccgacgagaagatc
cgcatcaagacgctgtcgctgggtgtggtcatcccggacatcacgttcgagctggcgaag
aagaacgaggacatgtacctgttctcgccgtacgacgtcgagcgcatctacggtgtcccg
ttcgcggacgtcaacgtcaccgagaagtactacgagatggtcgacgacaagcggatccgc
aagtcgaagatcaaggcgcgcgaattcttccagaccatcgccgagctgcagttcgagtcg
ggctacccgtacatcatgttcgaggacacggtgaaccgggccaaccccatcgagggcaag
atcacccactccaacctgtgctcggagatcctgcaggtctcgacgccgtcgctgttcaac
gacgacctctcctacagcgaggtcggcaaggacatctcctgcaacctcggttcgctgaac
atcgcgaagaccatggactcgcccgacttcgcgcgcaccatcgaggtgtcgattcgcgcc
ctcaccgcggtgtccgatcagacgcacatctactcggttccgtcgatcgagcagggcaac
aacgactctcacgccatcggcctcgggcagatgaacctgcacgggtacctggcccgtgag
cggatctactacggctccgacgaaggcatcgacttcacgaacatctacttctacaccgtc
gtgttccacgcggtgcgggcgtccaaccggatcgccatcgagcggggcacccacttcaag
ggcttcccgcagtccaagtacgcgtccggcgagtacttcgacaagtacaccgatcaggtg
tgggaaccgaagacggagcgggtgcgtcagctgttcgccgagtccggtgtgcacatcccg
acgcaggacgactggcgcgagctgaaggcgtccgtgcagaagtacggcatctacaaccag
aacctgcaggccgtcccgccgacgggctcgatctcgtacatcaactactccaccagctcc
atccacccggtggcgtcgaagatcgagatccgcaaggaaggcaagatcggccgcgtctac
tacccggcgccctacctgaccaacgacaacctggagtactaccaggatgcctacgagatc
gggtacgagaagatcgtcgacacctatgccgcggcgacgcagcacgtcgaccaggggctg
tcgctgacgctgttcttcaaggacaccgccaccacccgcgacatcaacaaggcgcagatc
tacgcgtggcgcaagggcatcaagacgctgtactacatccggctgcgtcagatggctctg
gagggtaccgaggtcgaaggttgcgtttcctgcatgctgtag

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