Rhodococcus sp. DN22: RA302_06945
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Entry
RA302_06945 CDS
T09949
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rhoo03110
]
RA302_06945 (clpB)
Chaperones and folding catalysts [BR:
rhoo03110
]
Heat shock proteins
HSP100
RA302_06945 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
nSTAND3
IstB_IS21
AAA_7
AAA_14
AAA_23
Mg_chelatase
bpMoxR
TniB
NACHT
AAA_24
T2SSE
AAA_25
Zeta_toxin
NBD_SMAX1
AAA_19
HOOK
DNA_pol3_delta2
FTA4
NYD-SP28
Mod_r
Motif
Other DBs
NCBI-ProteinID:
WVX71953
LinkDB
All DBs
Position
1515161..1517713
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AA seq
850 aa
AA seq
DB search
MDSFTPTTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTVV
HREAQAIVDRLPQTTGASSTPQLGREALAALTAAQHLATEMDDEYVSTEHVLYGLAGGDS
DVAQLLVRHGATQDALREAFTTVRGSARVTSPEPEGTYQALEKYSTDLTEAARSGKLDPV
IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVVSL
DLGSMVAGAKFRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI
KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTIGILRGLKERYEV
HHGVRITDSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERTV
RRLEIEEVALEKETDDASKARLEKLRQELADDREKLNQLSTRWQNEKQAIDSVRVLKEQL
ETLRGESERAERDGDLGKAAELRYGRIPALEKELEEAAVASGAASDGDVMLKEEVGPDDV
ADVVAAWTGIPAGRMMEGETEKLLRMESELGKRVVGQTDAVVAVSDAVRRARAGVADPNR
PTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGY
EAGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDVLLAVLDEGRLTDGQGRTVDFRNTILIL
TSNLGSGGTREQVMDAVRHAFKPEFINRLDDVVVFDSLSEEQLEHIVDIQLEQLQKRLAA
RRLTLEVNGAARMWLAVRGYDPLYGARPLRRLVQQSIGDQLAKLLLAGKVQDGDTVHVGV
SEDADQLVLS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
gtggactcgttcacaccaacaaccaagacccaggctgcgatgacggctgcactgcagtcg
gcgtcgtcggcgggtaatcccgatatccggcctgcccatctgctggtcgcattgctcgac
cagaccgacggcatcgctgccccactactcaaagctgtgggcgtcgaccccacggtcgta
caccgtgaagcacaggcaatcgtcgatcgcctgccccagacaaccggcgcaagctccacc
ccgcaactcgggcgtgaggcactcgcggcactcactgctgctcagcacctcgccaccgag
atggacgacgaatacgtctccaccgagcacgtcctctacggactggccggcggcgactcc
gacgtcgcgcagttgctcgtacgtcatggcgctacccaggacgcattgcgggaagccttc
accaccgtccgcggcagcgctcgcgtcaccagcccggagcccgaaggcacctaccaagcg
ttggaaaagtactccaccgacctcaccgaagctgcacgtagcggcaagctcgacccggtg
atcggtcgcgacaccgagattcgccgtgtcgtgcaggtgctctcgcgtcgtaccaagaac
aacccggtactcatcggtgagcccggcgtcggcaagaccgcgatcgtggagggccttgcc
caacgcatcgtcgcgggtgacgtcccggaatcgcttcgaggcaagaccgtcgtgtccctg
gacctcgggtccatggtcgccggtgccaagttccgcggtgaattcgaggaacgcctcaag
gcagttctcgacgacatcaagaacagtgccggacaggtcatcaccttcatcgacgagttg
cacaccatcgtcggcgccggcgccaccggtgaatccgcgatggacgcaggcaacatgatc
aagccgatgctcgcccgcggtgagctgcggctggtcggtgccaccacgctcgaggagtac
cgcaagtacatcgagaaggacgcagcactcgagcgtcgtttccagcaggtgctcgtcggt
gagccctcggtcgaggacaccatcggcatcctgcgcggtctcaaggagcgctacgaggtt
caccacggcgtacgcatcaccgactccgcgttggtggctgctgccgcgctgtcggaccgg
tacatcacctcgcggttcctgccggacaaggccatcgacctcgtggacgaagccgcatcg
cgacttcgtatggagatcgactcgcgacccgtcgagatcgacgaggtggaacgcactgtt
cgccgactcgaaatcgaagaagtggcactcgagaaggagacagacgacgcgtccaaggct
cggctcgagaagctgcgtcaggaactcgccgacgaccgcgaaaagctcaatcagctcagc
acccgctggcagaacgaaaagcaggccatcgactcggtgcgcgtgctgaaggaacagctc
gaaaccctgcgaggagagtccgagcgcgctgagcgtgacggcgatctgggcaaggcagcc
gagttgcgctacggccgcatcccggcgctggagaaggaactggaagaggcagcagtcgct
tccggagccgcctccgacggtgacgtgatgctcaaggaagaggtcgggccggacgacgtc
gcagacgtggtcgcagcctggaccggcattccggccggccggatgatggaaggcgagacc
gagaaactgctccgcatggagtccgaactcggcaagcgcgtcgtcggccagaccgacgcc
gtcgtcgccgtctcggatgcggttcgccgtgcccgagcaggtgtcgccgaccccaatcgg
cccaccggttccttcctgttcctcggcccgaccggcgtcggcaagacggagctcgccaaa
gccttggcggacttcctcttcgacgacgagcgcgcgatgatccgtatcgacatgagcgaa
tacggtgagaagcactcggtggcccgactcgtcggtgcccctccgggctacgtcggctac
gaagccggtggccagctcaccgaagcagttcggcgacgcccgtactcggtggtcctcttc
gacgaggtcgagaaggcacaccccgacgtgttcgacgtcctgctcgccgtgctcgacgaa
ggccgactcaccgacggtcaaggccgcacggtggacttccgcaacaccatcctgatcctg
acctccaacctgggatccggtggcacgcgggagcaggtcatggacgcggtacgccacgcg
ttcaagccggagttcatcaaccgtctcgacgacgtggtcgtcttcgactcgctctccgaa
gagcagttggagcacatcgtggacattcagctcgagcagctgcagaagcgtctggctgcg
cgtcgtctcaccctcgaggtgaacggtgcggctcggatgtggctcgcggtgcgcggctac
gacccgctgtacggcgctcggccattgcgtcgactcgttcagcagtcgatcggcgaccag
ctcgccaagctgctcctggccggcaaggtccaggacggcgacaccgtgcacgtcggtgtc
agtgaggacgcggatcagttggttctctcctga
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