Rhodococcus sp. DN22: RA302_28590
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Entry
RA302_28590 CDS
T09949
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rhoo03110
]
RA302_28590 (clpB)
Chaperones and folding catalysts [BR:
rhoo03110
]
Heat shock proteins
HSP100
RA302_28590 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
nSTAND3
IstB_IS21
Zeta_toxin
NACHT
AAA_14
AAA_24
bpMoxR
TniB
AAA_18
AAA_7
NBD_SMAX1
RNA_helicase
AAA_28
AAA_19
ABC_tran
T2SSE
DNA_pol3_delta2
DUF815
HAUS-augmin3
Prefoldin
Torsin
AAA_25
SHE3
ABC_tran_CTD
MAP65_ASE1
Motif
Other DBs
NCBI-ProteinID:
WVX70387
LinkDB
All DBs
Position
6188234..6190867
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AA seq
877 aa
AA seq
DB search
MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVEAL
RSDLERELSRRPKVSGPGATPGQVTITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALSE
EGSASAAGRVLASHGVTRDAFLTALTKVRGNQRVTSATPEGAYEALEKYGRDLVSEGRAG
KLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK
TIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGEGSL
DAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISILRGL
RERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELD
ELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAIRRVQ
ELRGDLERLRVEAEAAERNYDLNRAAELRYGEITELERRLEAAEEQLATRQGRNPLLREV
VTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSG
IRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRLIGAP
PGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFR
NTVIIMTSNIGSQHLLDGVTADGEIKPDARERVMAELRGHFRPEFLNRVDDIVLFSPLTL
PQIEYIVELQLTDLRNRLSERQIHLEITPEARRLIAEHGFDPVYGARPLRRYIAHEVETK
IGRALLRGEIKPDGTISVTVDGGELAVAYAEPAVAAA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggcagcctgactgaaaagtcacgagaagccctgcaggaagcccagaacgtc
gcgaccagaatgggccacaccgaagtcgacggagagcacctgctgctcgcattggtcgat
cagcaggaagggttggtgccccgactgctcgaacaggccggcgcgaatgtcgaagcactt
cgatccgatctggaacgtgaactgtcgcgtaggccgaaggtcagcggccccggcgcgaca
cccggtcaggtgacgatcacccagcgtctggccaagctgctcgacgccgcagagcgggag
gcgaagagactcaaggattcctacgtgtcggtggagcatcttgtgatggccctctccgag
gaaggatcggccagcgcggccgggcgggtcctcgccagtcacggggtcacacgggacgcc
ttcctcacagcgctgacgaaggtgcgcggcaatcagcgcgtcacctcggccaccccggag
ggggcgtacgaggcattggagaagtacggacgcgacctcgtctccgaggggcgggcaggc
aaactcgatccggtcatcggccgagatgccgagatacgcagggtaactcagatcttgagc
cggaaaacgaagaacaacccggtgctgatcggcgaccccggcgtcggtaagaccgcgatc
gtcgagggcctcgcccagcggatcgtccgcggcgacgtgcccgagggcctacgcgacaag
acgatcttctcgctcgacatgggttctctggtggccggtgcgaagtaccgcggcgagttc
gaggagcgactgcaggccgtgctgtccgaggtgaaggctgccgaggggcgcatcctgttg
ttcgtcgacgagttgcataccgtggtcggagcaggctcggtcggcggcgaggggtctctc
gatgccggcaacatgctcaaaccgatgctcgcacgcggcgaactgcacatgatcggtgcc
accactctcgacgagtatcgcaagcacatcgaatccgatgcggcactggagcgtcgattc
cagaccgttctcgtcgacgagcccagtgccgaggatgcgatctcgattctgcgcggactt
cgagaacgcctcgaggtgttccatggcgtgaaaattcaagacggtgcattggtggccgcc
gtgaccctctcgcaccggtacatcaccgaccgcttccttccggacaaggcgatcgatctc
gtagacgaggcatgcgctcggctccgcaccgaaatcgattcgatgcctgccgaactcgac
gagctcacccggaaggtgacccgtctggagatcgaagaggccgcactgtccaaggaaacg
gacgcggccagcaaagcgcgcctcgaagaattgcgcaaggagctggccgacctgcgggcc
gaggcagacgcccggcacgctcaatgggaggcggagcggcaggcgatccggcgggtgcaa
gaactgcgaggagatttggaacggttgcgcgtcgaggccgaggccgccgaacgcaactac
gacctcaatcgggcagccgagttgcgatacggcgagatcaccgagctcgaacgccggctc
gaggcggcggaggagcaactggccaccagacaaggccgaaatccgttgctgcgtgaagtg
gtcaccgaagacgagatcgcagagatcgtggccgcatggacgggtatcccggtcgcccgg
ctgcaagaaggtgagcgggagaagttgttgaagctcgacgagatcctgcacgagcgggtc
gtcggtcaggacgaggcggtgcaactggtcgcggacgctgtgatccgggcgaggtccggt
atccgtgatcctcgtcgaccgatcggttcgttcattttcctgggcccgacgggcgtcgga
aagaccgagcttgcaaagacattggccagcgccctattcgacagtgaagacaacatggtg
cgcctcgatatgagcgagtaccaggaacggcacacggtgagtcggctcatcggtgcacct
cccggatacgtcgggtacgacgaaggtggccagctcaccgaggcggtgcggcgtaagccg
tactccgtggtgctcttcgacgagatcgagaaggcccacgccgacgtcttcaataccctg
ctgcaggtgctcgacgacggccggatcaccgattctcaaggcaggcaagtcgatttccgg
aacacggtgatcatcatgacctccaacatcggatcccagcatctcctcgacggggtcaca
gccgacggcgaaatcaagccggacgccagggaacgggtgatggcagaactgcgcgggcat
ttccgccccgaattcctcaaccgggtcgacgacatcgtgctgttctccccactcaccctg
ccccagatcgagtacatagtggaactgcaactcaccgaccttcgaaacaggttgtcggag
cgccagatacacctggaaatcacgccggaggcacgccgactgatcgccgaacacgggttc
gaccctgtctacggtgcgcggccgctgcgccgatacatcgcacacgaggtcgaaaccaag
atcggccgtgcactgttgcgcggcgagatcaaaccggacggcaccatcagcgtcacggtg
gacggcggcgagcttgccgtcgcgtatgccgaacccgccgtcgcggcggcctga
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