Rhodococcus sp. WB1: A4U64_05815
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Entry
A4U64_05815 CDS
T10270
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rhow Rhodococcus sp. WB1
Pathway
rhow03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4U64_05815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhow03021
]
A4U64_05815
03400 DNA repair and recombination proteins [BR:
rhow03400
]
A4U64_05815
Enzymes [BR:
rhow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4U64_05815
Transcription machinery [BR:
rhow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4U64_05815
DNA repair and recombination proteins [BR:
rhow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4U64_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANZ24264
LinkDB
All DBs
Position
1266345..1269851
Genome browser
AA seq
1168 aa
AA seq
DB search
MLEGRILAVSSQTKAVAGIPGAPKRVSFAKIREPLEVPGLLDLQTDSFEWLIGSERWRAL
AAERGDGPVVGGLEEILAELSPIEDFSGSMSLSFSDPRFDEVKASVEECKDKDMTYAAPL
FVTAEFINNNTGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDRAVDK
STEKDLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIVERFG
FSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKDKRYDLARVGR
YKINKKLGLNAGQPIEASTLTEEDIVATIEYLVRLHASETTMTAPGGVEVPVEVDDIDHF
GNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGT
SQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHHSHYGRMCPIETPEGPN
IGLIGSLSVYARVNPFGFIETPYRKVEGGIVTDQVDYLTADEEDRHVVAQANSPVDADGR
FTEERVLVRKKGGEVEFVAATEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQR
QAVPLVRNEAPVVGTGMELRAAVDAGDVVVTEKSGVIEEVSADFITVMADDGTRRTYRLR
KFDRSNQGTCSNQRPIVDEGQRVESGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYED
AIILSQRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIG
AEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVF
SREDDDDLPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPQEDMPFLPDGTPV
DIILNTHGVPRRMNIGQILETHLGWIGKAGWNVQVAGDGERPEWAKNLSDDMLAAEPNTN
IATPVFDGAREDELTGLLGSTLPNRDGEVMVGPDGKATLFDGRSGEPFPYPVSVGYMYII
KLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIAMADGD
DEDLERAAANLGINLSRNESATVDDLAN
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacgcatcttggcagtctctagccagaccaaggcagttgccggaatcccc
ggagccccgaagagggtgtcgttcgcgaagattcgcgaacctctcgaagtccctgggctc
ctcgatctacagacagattccttcgaatggctgatcggctcggagcgctggcgcgcgctc
gctgccgagcgcggtgacggccccgtcgtcggtggcctcgaggagatcctggcggagctc
tctccgatcgaggacttctccgggtcgatgtccctgtccttctccgatccgcgcttcgac
gaggtcaaggcctcggtcgaggagtgcaaggacaaggacatgacgtacgcggcgccgctg
ttcgtcactgccgagttcatcaacaacaacaccggcgagatcaagagccagacggtcttc
atgggtgacttcccgatgatgaccgacaagggcaccttcatcatcaacggcaccgagcgt
gtcgtcgtctcgcagctggtgcgctccccgggcgtgtacttcgaccgcgcggtcgacaag
agcaccgagaaggacctgcacagcgtcaaggtgatcccgggccgcggcgcgtggctcgag
ttcgacgtcgacaagcgcgacaccgtcggcgtgcggatcgaccgcaagcgccgccagccg
gtcaccgtgctgctcaaggccctcggctggaccaacgagcagatcgtcgagcgcttcggc
ttctccgagatcatgatgtccaccctcgagaaggacaacacggccggcaccgacgaggcg
ctgctcgacatctaccgcaagctgcgcccgggcgagccgcccaccaaggagagcgcgcag
accctgctggagaacctcttcttcaaggacaagcgctacgacctggcgcgcgtgggacgt
tacaagatcaacaagaagctgggcctgaacgccggccagccgatcgaggcgtcgaccctc
accgaggaagacatcgtcgccacgatcgagtacctggtgcgcctgcacgcgagcgagacc
accatgacggcgcccggcggcgtcgaggttcccgtcgaggtcgacgacatcgaccacttc
ggcaaccgtcgcctgcgcaccgtcggcgagctcatccagaaccagatccgcgtcggcctg
tcccgcatggagcgcgtcgtccgcgagcggatgaccacccaggacgtcgaggccatcacg
ccgcagacgctgatcaacatccgtcccgtcgtggccgcgatcaaggagttcttcggaacc
tcccagctgtcgcagttcatggaccagaacaacccgctgtcgggcctgacccacaagcgc
cgcctctcggcgctcggccccggtggtctgtcccgtgagcgggccggcctcgaggtccgc
gacgtccaccactcgcactacggccgcatgtgcccgatcgagacgccggaaggcccgaac
atcggcctgatcggctccctgtcggtgtacgcgcgggtcaacccgttcggtttcatcgag
accccgtaccgcaaggtcgagggcggcatcgtcaccgaccaggtcgactacctgaccgcc
gacgaggaggaccgccacgtcgtggcgcaggccaactcgccggtcgacgccgacggccgc
ttcaccgaggagcgcgtcctcgtccgcaagaagggcggcgaggtcgagttcgtcgcggcg
accgaggtcgactacatggacgtctcgccgcggcagatggtgtcggtggccacggccatg
atcccgttcctcgagcacgacgacgccaaccgtgccctcatgggtgcgaacatgcagcgt
caggccgtgccgctggtgcgcaacgaggccccggtcgtcggtaccggcatggagctgcgt
gccgccgtcgatgccggcgacgtcgtcgtcaccgagaagtcgggcgtgatcgaggaggtc
tcggccgacttcatcaccgtgatggccgacgacggcacccgtcgcacctaccggctgcgc
aagttcgaccgctcgaaccagggcacctgctcgaaccagcggccgatcgtggacgagggc
cagcgcgtcgagtccggccaggtcctcgccgacggcccctgcaccgagaacggtgagatg
gcgctcggcaagaacctgctcgtggcgatcatgccgtgggaaggccacaactacgaggac
gcgatcatcctgtcgcagcgcctcgtggaggaggacgtgctcacctcgatccacatcgag
gagcacgagatcgacgcccgcgacaccaagctcggtgccgaggagatcacccgcgacatc
cccaacgtctccgacgaggtcctcgcggacctcgacgagcgcggcatcgtgcgcatcggt
gccgaggtgcgcgacggcgacatcctcgtcggcaaggtcaccccgaagggcgagaccgag
ctgacccccgaggagcggctgctgcgcgcgatcttcggcgagaaggcgcgcgaggtgcgc
gacacgtcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtccgcgtgttc
tcgcgcgaggacgacgacgatctgcccccgggtgtcaacgagctggtccgcgtgtacgtg
gcgcagaagcgcaagatccaggacggcgacaagctcgccggccggcacggcaacaagggc
gtcatcggcaagatcctcccgcaggaggacatgccgttcctgcccgacggcaccccggtc
gacatcatcctcaacacccacggtgttccgcgtcgtatgaacatcggccagatcctcgag
acgcatctcggctggatcggcaaggccggctggaacgtccaggtggccggggacggcgag
cgtccggagtgggcgaagaacctgtccgacgacatgctcgccgccgagccgaacaccaac
atcgccaccccggtgttcgacggtgcccgcgaggacgagctgacgggcctgctgggctcc
acgctgccgaaccgcgacggcgaggtcatggtcggccccgacggcaaggcgacgctgttc
gacggtcgctccggcgagccgttcccgtacccggtgtcggtcggctacatgtacatcatc
aagctgcaccacctggtcgacgacaagatccacgcgcgttcgaccggcccgtactcgatg
atcacccagcagccgctcggtggtaaggcgcagttcggtggccagcgcttcggtgagatg
gagtgctgggccatgcaggcctacggtgcggcgtacacgctgcaggagctgctcaccatc
aagtcggacgacgtggtgggccgcgtgaaggtctacgaggccatcgtgaagggcgagaac
atcccggagccgggcatccccgagtccttcaaggtgctcctcaaggagctccagtcgctg
tgcctgaacgtggaggtgctgtccagcgacggcgcggccatcgcgatggccgacggcgac
gacgaggacctcgagcgggcggcggccaacctgggcatcaacctttcccgcaacgagtcg
gccacggtcgacgacctcgcgaactag
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integrated database retrieval system
