Rhodococcus sp. D-6: RBB84_01655
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Entry
RBB84_01655 CDS
T10622
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox00260
Glycine, serine and threonine metabolism
rhox00460
Cyanoamino acid metabolism
rhox00630
Glyoxylate and dicarboxylate metabolism
rhox00670
One carbon pool by folate
rhox00680
Methane metabolism
rhox01100
Metabolic pathways
rhox01110
Biosynthesis of secondary metabolites
rhox01120
Microbial metabolism in diverse environments
rhox01200
Carbon metabolism
rhox01230
Biosynthesis of amino acids
rhox01240
Biosynthesis of cofactors
rhox04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RBB84_01655 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RBB84_01655 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RBB84_01655 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RBB84_01655 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RBB84_01655 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RBB84_01655 (glyA)
Enzymes [BR:
rhox01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RBB84_01655 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
eCIS_core
SelA
Motif
Other DBs
NCBI-ProteinID:
XBW04712
UniProt:
A0AAU7UYA4
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All DBs
Position
331399..332694
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AA seq
431 aa
AA seq
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MTAAPGADVNTAALNDLDPEVAEAMAGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNK
YAEGYPGRRYYGGCENVDVVEDLARNRAKELFGADFANVQPHSGAQANAAVLMALMTPGE
KLLGLDLAHGGHLTHGMKLNFSGKLYDVASYGVSKDDHRIDMDEVRDIALREKPKVIVAG
WSAYPRHEDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSTTVHKTLGG
PRSGLILAKQEWAKKINSAVFPGQQGGPLMHAIAAKAVALKIAASDEFKDRQRRTLSGAR
IIADRLSQSDVADKGISVLTGGTDVHLVLVDLRNSQLDGQQGEDALHEVGITVNRNAVPF
DPRPPMVTSGLRIGTPALATRGFGDEQFTEVAEIIAQTLVGGADAESLRTRVSALAQSVP
LYEGLEDWRLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcgcccggcgccgacgtgaacactgccgcactgaacgacctcgatcccgag
gtcgccgaggccatggccggcgagttgtcgcgtcagcgcgacacgctcgagatgatcgcg
tcggagaacttcgtgccgcgcgccgtcctccaggcccagggcagcgtcctgaccaacaag
tacgccgagggttaccccggtcgtcgctactacggcggctgcgagaacgtcgacgtcgtc
gaggacctcgcccgtaaccgcgccaaggagctcttcggcgccgatttcgcgaacgtgcag
ccgcactcgggtgcgcaggcgaacgcggcggtgctcatggcgctgatgacccccggcgag
aagctgctcggtctcgacctcgcgcacggcggccacctcacgcacggcatgaagctcaac
ttctccggcaagctgtacgacgtcgcgtcctacggggtcagcaaggacgaccaccgcatc
gacatggacgaggtccgcgacatcgcgctgcgcgagaagccgaaggtcatcgtcgccggc
tggtccgcctacccgcgccacgaggacttcgccgccttccgctccatcgccgacgaggtc
ggtgcctacctgtgggtcgacatggcgcacttcgccggtctggtcgccgcaggcctgcac
ccgtcgccggtgccctacgccgacgtcgtctccaccaccgtgcacaagaccctcggtggc
ccgcgttccggcctgatcctcgccaagcaggaatgggcgaagaagatcaactcggccgtc
ttccccggccagcagggcggaccgctcatgcacgcgatcgccgcgaaggccgtcgcgctg
aagatcgccgcgagcgacgagttcaaggaccgccagcggcgcaccctctccggtgcccgg
atcatcgccgaccgcctgtcgcagtccgacgtcgccgacaagggcatctcggtgctcacc
ggtggcaccgacgtgcacctggtcctggtcgacctgcgcaactcgcagctcgacggccag
cagggtgaggacgccctccacgaggtcggcatcaccgtcaaccgcaacgccgtgccgttc
gatccgcgtcccccgatggtcacctcgggcctgcgcatcggcaccccggcgctcgcgacc
cgcggtttcggcgacgagcagttcaccgaggtcgccgagatcatcgcgcagacgctcgtc
ggtggcgccgacgccgagtcgctgcggacccgcgtgagcgccctggcacagtccgtgccg
ctgtacgagggcctcgaggactggcgtctgatctga
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