Rhodococcus sp. PD04: U9J23_11180
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Entry
U9J23_11180 CDS
T11027
Name
(GenBank) lycopene cyclase family protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00906
Carotenoid biosynthesis
rhpd01100
Metabolic pathways
rhpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
U9J23_11180
Enzymes [BR:
rhpd01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
U9J23_11180
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
2-Hacid_dh_C
XdhC_C
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WSE24787
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Position
complement(2415599..2416714)
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AA seq
371 aa
AA seq
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MTHLPPTDLVVAGLGPAGRALAFRAAAAGLSVTAVDVRPQRRWTATYAAWADELPAWLPD
EVVAAHIDSPAAWTTGPHTVDRAYRVLDTTRLQEFLALDEVTVVTGRVRDVDADGVVLGD
GRRMPARYVVDARGVPADPGHAQQTAFGLIVDDAIASPALDGHAAWFMDWRRDNGTGPDD
VPSFLYAVPAGDGRTIVEETCLVGRPALGLGELERRLHVRLEARGVRTTGDEVVERVRFA
VEGAPTAPGVVGFGARGGLMHPATGYAVATALSTADAVVDAMRRGEDPDRVLWPVRARSV
ATLRQMGLRVLLRLDARGAIEFFDAFFALPVEQQRAYLSGRDDATGVAATMWRLFRVLPM
DARMTILRSLR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaccttccccccaccgacctcgtcgtggccggactcggtcccgccggccgtgcg
ctggcgttccgggcggccgcggccggactgtcggtgacggccgtcgacgtgcgcccgcag
cgccggtggaccgcgacctacgcggcgtgggccgacgaactacccgcctggctgcccgac
gaggtggtggcagcgcacatcgacagccccgcagcatggacgaccggaccccacaccgtc
gatcgcgcctaccgggtgctggacacgacgcgcctgcaggagttcctcgccctcgatgag
gtcacggtggtgacgggccgggtacgcgacgtcgatgcggacggtgtggtcctcggggac
ggtcgcaggatgcctgcgcgctacgtcgtcgatgcccgcggggttcccgccgatccggga
cacgctcagcagacggcgttcgggctgatcgtggacgatgcgatcgcttctccggcgctc
gacggtcacgccgcctggttcatggactggcgtcgcgacaacggcaccggccccgacgac
gtgccgtccttcctgtacgcggtgcccgccggtgacggacgcacgatcgtcgaggagacc
tgcctcgtcggtcgcccggcactcggtctcggcgaactcgaacggcgcctgcacgtccgc
ctcgaagcgcgcggcgtgcgtacgaccggcgacgaggtggtcgaacgggtgcgcttcgcc
gtcgagggcgcaccgacggcacccggggtggtcggcttcggcgctcgcggtggcctcatg
catcccgcaacgggatacgcggtggcgaccgccctgtccacggcggatgcggtggtcgat
gcgatgcgtcgcggcgaggatccggaccgcgtcctgtggcctgtccgcgcccgctccgtg
gcgaccctccggcagatgggactgcgggtcctgctgcgactcgacgcacgcggagcgatc
gagttcttcgacgcgttcttcgctctgccggtcgagcagcaacgcgcctacctgtccggt
cgcgacgatgcgaccggcgtggcggccacgatgtggcggttgttccgggtgctgccgatg
gacgcacgcatgacgattctgcgttcgctccgctga
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