Rhizobium sp. 11515TR: CKA34_16975
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Entry
CKA34_16975 CDS
T06097
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKA34_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_16975
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CKA34_16975
DNA repair and recombination proteins [BR:
rhr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKA34_16975
Prokaryotic type
CKA34_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASW07427
LinkDB
All DBs
Position
complement(3441456..3442157)
Genome browser
AA seq
233 aa
AA seq
DB search
MAEANIKLEESWKEALSPEFESPYMQQLKAFLVEEKQRGKVIFPRGSEYFRALDLTPLDE
VQVVILGQDPYHGFGQAHGLCFSVRPGVRIPPSLVNIYKELETDLGIPPARHGFLESWAK
QGVLLLNSVLTVEESQAASHQGKGWERFTDAVIRRVNDECDGVVFMLWGSYAQKKAAFVD
TERHLVLKAAHPSPLSAHNGFLGCRHFSKANAYLAEHGRDPIDWALPSNPEAQ
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgaacatcaagctggaggagagctggaaagaggcgctgtctccggagttc
gaaagcccctacatgcagcagctcaaggcttttctcgtcgaggaaaagcagcgcggcaag
gtgatctttccccgtggtagcgagtattttcgggcgctggatctgacgccgcttgacgag
gtgcaggtggtcatccttggacaggatccctatcacggcttcgggcaggcgcatgggctc
tgcttcagcgtgcgtcccggcgtgcgcatcccgccgtcgctggtcaatatctacaaggaa
ctggaaacggatctcggcatcccgccggctcgccacggctttctggaaagctgggcaaag
cagggcgtgcttctgctcaacagcgtgctgacggtcgaggaatcgcaggcagcctcccat
cagggcaagggctgggagcgctttaccgatgccgtcatccgcagggtgaacgacgaatgc
gatggggtcgtcttcatgctctggggttcctatgcgcagaagaaggccgcctttgtcgat
accgagcgccatctggtgctgaaggcagcgcatccttcgccgctgtcggcccataacggc
ttcctcggctgccggcatttttccaaggccaatgcctatctagccgagcatggccgggat
ccgatcgattgggctctgccgagcaatcctgaggctcagtaa
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