Rhodococcus sp. SGAir0479: E7742_11710
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Entry
E7742_11710 CDS
T11403
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhsq Rhodococcus sp. SGAir0479
Pathway
rhsq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E7742_11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhsq03400
]
E7742_11710
Enzymes [BR:
rhsq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E7742_11710
DNA repair and recombination proteins [BR:
rhsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E7742_11710
Prokaryotic type
E7742_11710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QCQ91826
LinkDB
All DBs
Position
complement(2502774..2503451)
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AA seq
225 aa
AA seq
DB search
MVTKELVDLIDPGWAKALAPVEGRIAEMGDFLRAEVAAGRRYLPAGADVLRAFTQPFEDV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPVPRSLNNIFAEYSRDLGYPTPSNGDLTPWTE
NGVLLLNRVLTVAPGEAGSHRRKGWEAVTEQAIRALVERGTPMVAILWGRDAATLKPMLG
DVPTVESAHPSPLSASRGFFGSRPFSRANALLTELGADPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgaaggaattggtcgacctgatcgatccgggctgggccaaggccctggcgccc
gtcgaggggcggatcgccgagatgggcgacttcctgcgggccgaggtcgcggcaggacgc
cggtacctgccggcaggcgccgacgtgctgcgcgccttcacgcaacccttcgaggacgtg
cgtgtgctgatcgtcggccaggatccgtatccgactccgggacacgctgtggggctgagc
ttttcggtcgcgccggacgtgcggcccgtgccgcggagcctgaacaacatcttcgccgag
tacagccgggacctcggctacccgaccccctcgaacggtgatctcaccccgtggaccgag
aacggcgtcctgttgctcaaccgggtgctcaccgtcgcgccgggggaggccggatcgcat
cgtcgcaagggctgggaggccgtcaccgagcaggcgattcgcgcgctcgtcgagcgcggg
acgccgatggtggcgatcctgtggggccgcgatgcggccaccctgaaaccgatgctgggt
gatgtccccaccgtggaatcggcgcacccctcgccgttgtcggcgtcacgtgggttcttc
gggtcccggcccttcagccgcgccaacgcgctcctgacggaactcggtgcggacccggtg
gactggcgtctgccctga
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