KEGG   Rhodoferax koreense: RD110_22945
Entry
RD110_22945       CDS       T04721                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rhy  Rhodoferax koreense
Pathway
rhy02024  Quorum sensing
rhy03060  Protein export
rhy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RD110_22945
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RD110_22945
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD110_22945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhy02044]
    RD110_22945
Enzymes [BR:rhy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RD110_22945
Secretion system [BR:rhy02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RD110_22945
  Eukaryotic Sec-SRP protein
   RD110_22945
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 AAA_30 APS_kinase AAA_16 cobW AAA_31 AAA_24 AAA_33 DO-GTPase1 AAA_19 nSTAND3 Helicase_RecD AAA_18 Thymidylate_kin ABC_tran ResIII AAA_14 Mg_chelatase YqeC AAA_17 TsaE AAA_28 ArsA_ATPase KTI12
Other DBs
NCBI-ProteinID: APW39704
UniProt: A0A1P8K111
LinkDB
Position
complement(4957009..4958382)
AA seq 457 aa
MASALTEKLSRLVKEMRGQARITEGNVADMLREVRMALLEADVALPVVRDFVARVKEKAL
GQEVMGSLSPGQALVGIVNRELAATMGQGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
AKLLIEKRKKKVLTVSGDVYRPAAIEQLKTVTKQAGAEWFPSTPEQKPADIARAALDYAR
KHYFDVLLVDTAGRLAIDEALMREIKDLHAILNPVETLFVVDAMQGQDAVNTAKAFSDAL
PLTGIVLTKTDGDSRGGAALSVRHITGAPIKFAGTSEKIDGLEVFDAERHAGRVLGMGDI
VALVEQVTAGVDMAAAQKLAAKVKSGETFDLNDFLAQIQQMKQMGGLSSLMDKLPTQMAA
KAGQMDMDKAERDIRRKEGIIHSMTPLERRKPDLIKATRKRRIAAGAGVQVQEVNRMLNE
FGQMQDMMKKMKGGGMMKMLKRMGGMKGMGGMPKMPF
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggcctccgccctcaccgaaaaactctcccgcctcgtcaaagaaatgcgcggccaggcc
cgcatcaccgagggcaacgtcgccgacatgctgcgtgaagtgcgcatggccctgctcgag
gccgacgtggcgctgccggtggtgcgcgacttcgtggcccgcgtcaaggaaaaggcgctc
ggccaggaagtgatgggctcgctgtcgccgggccaggcgctggtgggcatcgtgaaccgt
gaactggccgccaccatgggccagggtgtgagcgacatcaacctcgccgcgcagccgccg
gcggtgatcctgatggccggcctgcagggcgcgggcaagaccaccaccaccgccaagctg
gccaagctgctcatcgagaagcgcaagaagaaggttctcaccgtgtcgggcgacgtgtac
cgcccggcggctatcgaacagctcaagaccgtgaccaaacaggctggtgccgaatggttc
ccgagcacgcccgagcagaagccggccgacatcgcccgcgccgccctcgactacgcgcgc
aaacattatttcgacgtgttgctggtcgacaccgccggccgcctggccatcgatgaagcg
ctgatgcgcgaaatcaaggacctgcacgccatcctgaaccccgtggaaacgctgttcgtg
gtcgatgcgatgcagggccaggatgcggtgaacaccgccaaggcgttctccgatgccctg
ccgctgacgggcatcgtactgaccaagaccgatggcgactcgcgcggcggcgcggcgctg
tcggtgcggcacatcacgggcgcaccgatcaagttcgccggcaccagcgaaaaaattgat
ggcctggaggtcttcgacgccgaacggcatgcagggcgcgtgctcggcatgggcgacatc
gtggccctggtggagcaggtcacggccggtgtcgacatggccgcagcgcagaagctcgcc
gccaaggtgaagagcggcgaaaccttcgacctgaacgacttcctggcccagatccagcag
atgaagcagatgggcggcctctccagcctgatggacaagctgcccacgcagatggccgcc
aaggccggccagatggacatggacaaggccgaacgtgacatccgcaggaaggaaggcatc
atccacagcatgaccccgctggagcgccgcaagcccgacctgatcaaggccacgcgcaag
cgccgcatcgctgccggtgccggcgttcaggtgcaggaggtcaaccgcatgctcaacgag
ttcgggcagatgcaggacatgatgaaaaagatgaagggcggcggcatgatgaagatgctc
aagcgcatgggcggcatgaaaggcatgggcggtatgccaaaaatgcctttctga

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