Rhodoferax koreense: RD110_24035
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Entry
RD110_24035 CDS
T04721
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00470
D-Amino acid metabolism
rhy00550
Peptidoglycan biosynthesis
rhy01100
Metabolic pathways
rhy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RD110_24035
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RD110_24035
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RD110_24035
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhy01011
]
RD110_24035
Enzymes [BR:
rhy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RD110_24035
Peptidoglycan biosynthesis and degradation proteins [BR:
rhy01011
]
Precursor biosynthesis
Amino acid ligase
RD110_24035
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
ATPgrasp_ST
ATP-grasp_4
CPSase_L_D2
TTL
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
APW39896
UniProt:
A0A1P8K1M8
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Position
complement(5193052..5194035)
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AA seq
327 aa
AA seq
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MSATGQNHSNLGKVAVLMGGASAEREVSLMSGTGVLAALRSQGVDAHAFDPAERDLVELK
REGFARCFIALHGRFGEDGTVQGALELLGIPYTGSGVMASSIAIDKIMTKRVWIAEGVPT
PKYRLLAQGSIDRRQVIEVPDELGLPVIVKPAREGSSIGVNKVEGYSGMVEAVDAVLRLD
SQVLCEAFIEGDEVTCPVLGTGDEAQALPVIRIVAPEGNYDYQNKYFTDTTQYLVPCGLP
AGEEEAIQALVLKAYRVLGCRGWGRIDVMIDKATRKPYLLEINTSPGMTSHSLVPMSARA
AGLSYEALCLRLLQAAALDNAPGAPQP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctacaggccaaaatcattcaaatctgggtaaggttgccgtactcatgggcggc
gcttcggccgagcgcgaggtgtcgctgatgtcgggcaccggcgtgctggccgcactgcgc
agccagggggtggacgcgcatgcgttcgacccggccgagcgggatctggtcgagctcaag
cgcgagggcttcgcgcgctgtttcatcgcgctgcacggccgcttcggcgaggacggcacg
gtgcagggtgcgcttgaactgctgggcattccctacaccggctcgggcgtgatggcgtcg
agcatcgccatcgacaagatcatgaccaagcgggtctggatcgccgagggcgtgccgacg
ccgaaataccgcctgctcgcccagggcagcatcgaccggcgccaggtgatcgaggtgccg
gacgagctcggcctgccggtgatcgtcaagccggcgcgcgaaggttcttccatcggcgtg
aacaaggtcgagggctactcgggcatggtggaagcggtggacgccgtgctgcgcctcgat
tcgcaggtgctgtgcgaggcgttcatcgaaggcgacgaggtgacctgcccggtgctgggc
accggggacgaggcgcaggccctgccggtgatccgcatcgtcgcgcccgaaggcaactac
gactaccagaacaagtacttcaccgacaccacgcagtacctggtgccctgcggcctgccc
gccggcgaagaggaggcgatccaggctctggtgctcaaggcctaccgcgtgctcggctgc
cgcggctgggggcgcatcgacgtgatgatcgacaaggccacgcgcaagccctacctgctg
gagatcaacacctcgcccggcatgaccagccattcgctggtgccgatgtcggcccgtgcc
gccggcctgtcgtacgaagccctgtgcctgcggctcttgcaggccgcggcgctggacaac
gcaccgggagcgcctcagccatga
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