Rhodoferax koreense: RD110_26280
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Entry
RD110_26280 CDS
T04721
Name
(GenBank) hypothetical protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00071
Fatty acid degradation
rhy00280
Valine, leucine and isoleucine degradation
rhy00310
Lysine degradation
rhy00362
Benzoate degradation
rhy00380
Tryptophan metabolism
rhy00410
beta-Alanine metabolism
rhy00640
Propanoate metabolism
rhy00650
Butanoate metabolism
rhy00907
Pinene, camphor and geraniol degradation
rhy00930
Caprolactam degradation
rhy01100
Metabolic pathways
rhy01110
Biosynthesis of secondary metabolites
rhy01120
Microbial metabolism in diverse environments
rhy01200
Carbon metabolism
rhy01212
Fatty acid metabolism
Module
rhy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RD110_26280
00650 Butanoate metabolism
RD110_26280
09103 Lipid metabolism
00071 Fatty acid degradation
RD110_26280
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD110_26280
00310 Lysine degradation
RD110_26280
00380 Tryptophan metabolism
RD110_26280
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RD110_26280
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD110_26280
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RD110_26280
00930 Caprolactam degradation
RD110_26280
Enzymes [BR:
rhy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RD110_26280
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RD110_26280
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RD110_26280
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Gene cluster
GFIT
Motif
Pfam:
ECH_1
ECH_2
3HCDH_N
DUF615
Motif
Other DBs
NCBI-ProteinID:
APW40274
UniProt:
A0A1P8K2P3
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All DBs
Position
5691651..5693414
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AA seq
587 aa
AA seq
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MYKHLKLEVDADGVALLTLDLADRPMNVFTPGFTVDLRAAVAQIAQRADIRGAVITSGKA
NGFLAGADLKDFAGLYAQGLTAAQGAQQAAPGALALRELELCGKPVAAAINGLALGGGYE
LCLACHHRVLLDDSRAFVGLPEVTVGLLPGGGGTQRLPRLLGIASALPLLLSGRRVAPAE
ALMLGLVDAVAPASGLLPAARRWVLGHPGTQQPWDLKGYRLPGGAGPMASHAAESFGLTL
ARLRAETQDNYPAPQAILSAVYEGTQLPFERGLHIEAQYFGQLLANPVSRNLMRTLFVNR
GAAGKRARGAVTLPRADVARLGLIGTGPHADALAEAAAAARIEIVRAAAGAMPPMPCDLV
ADADLGDKPPGDVVGLRLHTLRPDAPLMEIVAGVRTAPIVLARALDLAQQLRATPIVVRG
GLGAYTAHLARAYAQESRAMCEEGVLPALVNNAARRAGYAAGPLDGARPTPVATAQPAAQ
PGVEALQQRLLCIQALTAVQCMEAGMLSDPADADLGGVLGCGFPAWTGGPLSYIETVGVS
TFVARCDRLAERHGGRFRPPAGLRQRALNGEGLYPGPAPKRTADLPN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagcacctgaaactcgaagtcgatgccgacggcgtcgcgctcctgactctcgac
ctcgccgaccggccgatgaacgtcttcacacccggcttcacggtcgacctgcgcgcggcg
gtggcgcagatcgcgcaacgcgccgacatccgcggtgccgtcatcacctcgggcaaggcc
aatggcttcctcgccggcgccgacctgaaggacttcgccggcctgtatgcgcaagggctg
acggccgcgcaaggcgcgcagcaggccgcgcccggcgcgctggccctgcgcgagctggag
ctttgcggcaagccggtcgcggcggccatcaacgggctggcgctgggcggtggctacgag
ttgtgcctggcctgccaccaccgcgtgctgctggatgactcgcgcgcattcgtcggcctg
cccgaggtcaccgtgggcctgctgccgggcggcggcggcacgcagcgcctgccacgcctg
ctgggcatcgcaagcgccttgccgctgctgttgtccggccggcgtgtggcgccggccgaa
gcgctgatgctgggcctggtggatgcggtggcgccggcctccgggttgctgccggcggcg
cggcgctgggtgctcggtcacccgggcacgcagcagccatgggacctcaagggctaccgg
ctccccgggggggcgggtccgatggcatcccatgcagccgaaagcttcggtctcacgctg
gcacgcctgcgggccgagacgcaggacaactatcccgcaccgcaggccattctgtcggcc
gtctatgaaggcacgcaactgccgttcgagcgtggcctgcacatcgaggcgcagtacttc
ggccagttgctggcgaacccggtgtcgcgcaacctgatgcgcacgctcttcgtgaaccgt
ggcgcggccggcaagcgggcgcgcggcgccgtcacgctgccgcgcgccgatgtggcgcgc
ctgggcttgatcgggacgggcccgcacgccgatgccctggccgaggccgccgcggcggcc
cgcatcgagatcgttcgcgccgctgcgggcgcgatgccgccgatgccctgtgacctggtg
gccgatgcagacctgggagacaaaccaccgggcgatgtcgtcggcctgcgcctgcacacg
ctgcggccggacgcgccgctgatggaaatcgtcgccggcgtgcgcaccgcacccatcgtg
ctggcgcgggcgctggacctggcgcagcaactgcgcgccacacccatcgtggtccggggt
ggactgggagcgtacaccgcgcacctggcgcgggcgtacgcgcaggaaagccgtgccatg
tgcgaagagggtgtcctgccggcgttggtgaacaacgctgcgcggcgggcgggctatgcc
gccggcccgctggacggcgcgcgaccgacgccggtggccacggcgcagccagccgcccag
ccgggcgtggaggcgctgcagcaacggctgctgtgcatccaggcgctcaccgccgtgcag
tgcatggaagcgggcatgctgagcgaccccgccgatgccgatctcgggggcgtcctgggc
tgcgggtttccggcctggacgggcgggccgctgtcctacatcgagaccgtcggtgtctcc
accttcgtcgcgcgttgcgaccggctcgccgagcggcacggcggacgcttccgccccccg
gcgggcctgcgccagagggcactgaatggagaaggcctgtatcccgggccggcaccgaaa
cgcaccgcggacctgccgaactga
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