Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_04890
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Entry
BA173_04890 CDS
T05695
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ric
Rickettsia sp. MEAM1 (Bemisia tabaci)
Pathway
ric03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ric00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BA173_04890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ric03021
]
BA173_04890
03400 DNA repair and recombination proteins [BR:
ric03400
]
BA173_04890
Enzymes [BR:
ric01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BA173_04890
Transcription machinery [BR:
ric03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BA173_04890
DNA repair and recombination proteins [BR:
ric03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BA173_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF5121
RelB
Motif
Other DBs
NCBI-ProteinID:
ASX28149
UniProt:
A0A249E3G3
LinkDB
All DBs
Position
963928..968061
Genome browser
AA seq
1377 aa
AA seq
DB search
MVSLRDNIEVQPLSHNKRVRKNFGHINLVADIPNLIEIQKNSYEKNFLQLDTKDSERKNK
GLQSILNSIFPISDPSNIANLEFVKYEFDNPKYDVEECTQRSLSYDSSLKVTLRLSIWDI
DEDTGSREIKGIKEQQVYMGNIPLMTKNGTFIINGTERVVVSQMHRSPGVFFYHDEGKVH
SSRKLLYSARVIPYRGSWLDLEFDTKDIIYFRIDRKRKLYATTLLKAIGMSTEEIIKFYY
DSVNYKVVKNKGWAVKFMPSHITAHRLTSDLIDADTGNVLLKAGQKITPSLAKKYAGEGL
NNEGLNNILVSHEALIGKYLSEDLKDPENGEVLAKIGEMVTVELLSVISDLKIKNISVLV
INPQSGPYIRNTLFSDKNQDRESALFDIFRVLRPGEPANIEAAESLFYNLFFDPERYDLS
EVGRIKMNSRLELNISDETTVLTTDDIKNILRVLVELKDGKGIIDDIDHLGNRRVRSVGE
LIENQFRIGLVRMEKSVIERMSAGDIDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQT
NPLSEITHKRRLSALGPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATY
ARINKHGFIESPYRKVKDGHVTDEVVYLSAIEEGKYKIGQANSKVDKDGVLQGEFINCRV
EGGNFVMVEPHEVDFIDVTPMQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDA
PFVGTGVEGVVAKDSGASVLALNDGIVEQVDSNRIVIRAIGQKTESAPSVDIYNLLKFQK
SNHNTCINQKPLVKVGHYVKKNDIIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILI
SERIVKEDVFTSVHIEEFEVIARDTRLGPEEITRDIPNVSEEALRHLDEVGIIYVGAEVK
AGDILVGKVTPKSESPITPEEKLLRAIFGEKAFDVKDSSLHVPSGVSGTVVEVRVFSRRG
VEKDQRAIAIEKQQIEKLAKDRDDELEIIEHFVFSWLEKLLVGQISINSPKTVKTGQTIT
SEILKGLSKGQLWQFTVEDANVMNEIEQLKSHYDGKKEALNKRFATKVEKLQSGDDLPQG
ALKVVKVFIATKHKLQPGDKMAGRHGNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPS
RMNIGQVLETHLGWASVNLARKIAGLVEEYKTNHVSIEKIKKFLIELYGENINHILEKSE
EEIISFCNEAAKGVYFATPVFDGAKVEDVKDMLRLAGQDLSGQVKLIDGRTGEYFDRLVT
VGQKYLLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYT
LQEMLTVKSDDVNGRIKIYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLEVTS
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattaagggataatattgaagtacaacccttgtcacataataaaagagtaaga
aaaaattttggtcatataaatttagtagcagatataccgaatttaattgagattcaaaaa
aattcatatgaaaaaaattttctacagctagatacaaaagattccgaaagaaaaaataaa
ggcttacaatctatattaaattcaatttttcctatctctgatccttctaatattgctaac
ttagaattcgttaaatatgaatttgataatccaaaatatgatgtagaggaatgcactcaa
agaagcttaagttatgattcttctcttaaggtaaccttaaggttaagtatttgggatata
gacgaagatactggtagccgagagattaaaggtatcaaagaacaacaagtatatatgggt
aacatcccattaatgactaaaaatggtacttttatcattaatggtacagaaagagtagtt
gtatcgcaaatgcatcgctcacctggggtgttcttctatcatgatgagggcaaagttcat
tcttctagaaaacttttatattctgcacgtgttattccatatagaggatcatggcttgat
ttagagtttgatactaaagatattatttattttagaatagatagaaaaagaaaactttat
gctactactttgcttaaagcaattggcatgagcacagaggaaattataaaattttattat
gattcagtaaattataaagttgttaaaaataagggatgggcagttaaatttatgcctagc
catattactgcacatagattaacaagtgatttaatagatgctgatacaggaaatgtttta
cttaaagcgggacaaaaaattactcctagtttagctaaaaaatatgctggggaagggctt
aataatgaagggcttaataatattttagtatctcatgaagctttaattggtaaatattta
tctgaggatttaaaagatcctgaaaacggtgaagtattagcaaaaatcggcgaaatggtt
actgttgagttacttagtgtaattagtgatctgaaaattaaaaatattagcgtactagta
attaatcctcaatccggtccatatataagaaatactttattttctgataaaaaccaggat
cgtgaatcagcattatttgatatttttagagtattaagacctggcgaacctgctaatatt
gaagctgctgaaagtttattttataatttattctttgaccctgaaagatatgatctttca
gaagtaggtcgaataaaaatgaattcaaggttagaattaaatatctctgatgaaactact
gttttaactacagatgatataaaaaatatactaagagttttagtagaacttaaagatggc
aaagggattatagacgatattgatcacttaggtaacagaagagttagatcggttggtgaa
ttgatagaaaatcaattcaggataggtcttgttcgaatggaaaagtcagtgattgaaaga
atgtcggcaggtgatattgatacagtaatgcctcacgatttagtgaattctaaaattttg
gtttcagtagtaaaggaatttttcagtacttcgcaattatctcaatttatggatcaaaca
aatccattatctgaaataactcataaaagaagattatcagcattaggtcctggtggtctt
agtcgtgatagagccggctttgaagtgcgtgatgtgcatccaactcactacggtcgtatt
tgtcctattgaaacacctgaaggtcaaaatatcggactaattaactctatggcgacttat
gctagaataaataagcatggttttatagaaagcccatatagaaaagtcaaagacggacat
gtaaccgatgaagtagtatatctttcagctattgaagaagggaagtataagatcggtcaa
gcaaattctaaggttgataaagatggagtattgcagggcgaatttattaattgccgagtt
gaaggtggcaattttgtaatggtagagccacatgaagtagacttcattgatgtaacgcct
atgcaggttgtatctgttgcagcttctcttataccgttcttagaaaatgatgatgctaac
cgtgctttaatgggatcaaacatgcaaaggcaagcggttcctttaattaaaactgatgca
ccttttgtgggtacaggggttgagggagtagtagcaaaagattctggagcatctgtgctt
gcattaaatgatggtatagttgagcaagtagattcaaatagaattgtaattagagctatt
ggtcaaaaaaccgaaagtgcaccttcagttgatatttataacttattaaaattccaaaag
tctaaccataatacttgtatcaatcaaaagcctttagttaaggttggtcattatgttaag
aagaatgatattatagctgatgggcctagtaccgataatggtgaaattgctttaggcaga
aacgttttagtcgctttcttaccttggaatggatacaattttgaagattcaattttaata
tcagagcgaatagtaaaagaagacgtatttacttctgtccatattgaagagtttgaagtc
atagcaagagatactcgccttggtcctgaagaaattacgcgtgatatacctaatgtaagt
gaagaagcacttcgtcatcttgatgaggtcggaataatttatgtaggtgcagaagtaaaa
gcaggtgatattttagtagggaaagtaacgccgaaaagtgaatcacctattactcctgag
gaaaaattactgagagctatttttggagaaaaagcttttgatgtgaaagattcatcgctg
catgttccttccggggttagcggaacggtagtagaagtaagagtattctctcgtcgaggt
gttgaaaaagatcagcgtgctattgctattgaaaaacaacaaattgagaaattagcaaaa
gaccgtgatgatgaattagaaattatcgagcattttgtatttagttggcttgagaagctt
ttagtaggacagataagtattaatagtcctaagacagtaaagactgggcaaactattaca
agcgaaatattaaaaggtttatctaaaggacaactttggcagtttactgttgaagatgca
aatgtaatgaacgaaatagaacagctcaaaagtcattatgatggtaagaaagaagctctt
aataaaaggtttgctactaaagtagaaaaattacaaagtggagatgatttacctcaaggt
gctttaaaagttgtaaaagtatttattgcaactaagcataaattacagcctggtgataag
atggcgggaagacacggaaataaaggggttatttcacgtattgtgccagaagaggatatg
ccattcttagaggatggaactgtagttgatattgttctcaatcctttaggtcttccttct
cgtatgaatatagggcaagtgcttgaaactcatcttggttgggcatcagtgaatctagca
agaaaaatagcaggtttagtagaagaatataaaactaaccatgtaagtattgaaaagatt
aaaaagtttttaatcgagctatatggtgaaaatattaaccatatacttgaaaaatctgaa
gaggaaattatttcattctgtaatgaagctgctaagggagtatattttgcaactccagta
tttgatggtgcaaaggttgaagacgttaaggatatgctaaggcttgcaggtcaagatctt
tcagggcaagtaaagctaattgatggtagaactggtgaatattttgatcgcttagtaact
gtagggcagaaatatttattaaagctacatcacttagtagataataaaattcactctcgt
tctataggtccttatagtttagtgactcagcaacctcttggaggaaaatcgcattttggt
ggtcagcgttttggggaaatggaatgctgggcattacaagcatatggggctgcttatact
ttacaagaaatgttaactgttaaatcagatgacgtaaatggtagaattaagatttatgac
tctatagtgcgtggtgaaaataattttgagtctggtattcctgaatcatttaacgtgatg
ataaaagaatttagatctttatgtcttaatgtaaaacttgaagtgacatcttag
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