Roseovarius indicus: RIdsm_01339
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Entry
RIdsm_01339 CDS
T06222
Symbol
iclR_3
Name
(GenBank) Acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_01339 (iclR_3)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RIdsm_01339 (iclR_3)
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
DUF4777
EutK_C
TrmB
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QEW25552
UniProt:
A0A5P3A835
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Position
complement(1436301..1437083)
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AA seq
260 aa
AA seq
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MLVRRVEDVLELLEFYAEFQKPATISEVSQHFGWPRSSTFNILTTMSSRGYLYESGGKGQ
YYPTSRLFRVAQSINAGAPLPDAVISLLDELAEDTEETVFLAAPSGLQAVFLEVRQSPHR
VRYFADVGGQIPLFATATGQAILSQLPERHVDSILRRVRFERYGPGTPMSIDEVMRSIRQ
SLRRGYFVSASNYSQDLGGVSVPLVIDGRAYAITVAGPLSRFEPRQLDYVKLLHDRVPAY
LGTDFFSDSVKGLKPLATTE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgagacgcgtagaagatgttctggaattgctggagttctacgccgaattccag
aagcccgcgaccatatccgaagtctcgcagcatttcggctggcccaggtcgagcacgttc
aacatcctgacgaccatgtcatcgcgcggctacctgtacgagtccggcggcaagggccag
tactacccaacgtcccggctgtttcgcgtcgcccaatccatcaacgcaggcgcacccctg
cccgacgcggtcatcagcctgctggacgaactggccgaggacaccgaggaaaccgttttc
ctggccgccccatccgggcttcaggccgtctttctcgaagtacgccaatccccgcacagg
gtacgctacttcgccgatgtcggcggccagatcccgctattcgccaccgccacggggcag
gcgatcctgagccagcttccggaacgccatgtcgacagtatcttgcgccgcgtgcgcttc
gagcgctacgggcccggcaccccgatgagcatcgacgaggtcatgcgctcgatccggcaa
tccttgcgtcggggctatttcgtgagcgcatcgaattactcgcaagaccttggtggggta
tccgtacccctcgtgatcgacgggcgcgcctacgcgatcacagtggcgggcccactgtca
cgctttgaaccgcgtcagcttgactacgtcaaactcctgcacgaccgcgtaccggcctat
ctcggcaccgacttcttcagcgacagcgtcaaggggctgaaaccgctcgccaccacggaa
tag
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