Roseovarius indicus: RIdsm_03268
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Entry
RIdsm_03268 CDS
T06222
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rid
Roseovarius indicus
Pathway
rid00470
D-Amino acid metabolism
rid00550
Peptidoglycan biosynthesis
rid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RIdsm_03268 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RIdsm_03268 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rid01011
]
RIdsm_03268 (murD)
Enzymes [BR:
rid01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RIdsm_03268 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rid01011
]
Precursor biosynthesis
Amino acid ligase
RIdsm_03268 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AlaDh_PNT_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QEW27452
UniProt:
A0A0T5P535
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All DBs
Position
complement(3399694..3401103)
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AA seq
469 aa
AA seq
DB search
MIPVTGFENARVGILGLGRSGLSAARALRAGGAHPVCWDDNPAAREMAETEGFDVGDLLR
EGAFDAIARLIVSPGIPHLYPAPNKVVANALRAGVPVDNDIGLFFLSLGTEKWAEFDDPP
KVIAVTGSNGKSTTSALIHHVLEHAGKTSQLAGNIGRGVLDIDPPDDGGVVVLELSSYQT
ELARALTPDVAVFSNLSPDHLDRHGGLGGYFAAKRRLFAEGGPDRAVIGVDEPEGLFLAG
QLSEGPDDARVIRVSVEGKLSGPGWSVFAKKGYLSEYRKGKQTGSIDLRPVKGLPGRHNH
QNACAAYAACRALGLSPRVIEQGFHSFEGLPHRSQVIAEKNGVTFVNDSKATNVDSALKA
LEAFSSIRWICGGLEKEGGVGGLKPGLANVVKAYVIGREAAEFAMQLEGVGAEVCTTMAA
AVAQAMDEAQPGDTVLLAPAAASFDQYDNFEKRGEDFIAEVQARLQAGL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgaccggtttcgagaatgcgcgtgtcgggatcctcgggttggggcgctcg
ggactgtcggcggcaagggcgctgcgggcaggcggggcgcatccggtctgctgggacgac
aacccggctgcaagggagatggccgagaccgaagggttcgacgtgggcgacctgttgcgg
gagggggcgttcgatgcgattgcgcggctgatcgtgtcgccagggattccgcatctctac
cccgccccgaacaaggtcgtggccaacgcgctcagggccggggtgccggtggacaacgat
atcgggctttttttcctgtcgctcggcaccgagaagtgggccgagttcgacgacccgccc
aaggtgatcgcggtgacggggagcaacggtaagtcaaccacgtcggcccttatccatcat
gtgctggagcatgcgggcaagacgtcgcaactggccgggaatatcgggcgcggggtgctg
gatatcgacccgccggatgatggcggggtcgtggtgctggagctgagttcctaccagacg
gagctggcgcgcgcgctgacgccggatgtggcggtgttttccaacctgtcgccggatcac
cttgaccggcacggggggctgggcgggtatttcgcggccaagcgccggctgtttgccgag
ggtgggccggatcgggcggtgatcggcgtggatgagccggaggggctattcctggccggg
caactctcggaagggccggacgatgcgcgggtgatccgggtgtcggtggagggcaagctt
tcggggccgggatggtcggtgtttgccaagaaaggctatctgagcgagtaccggaagggg
aagcagaccgggtcgatcgatctgcgccccgtgaagggcctgccggggcggcacaatcac
cagaacgcctgtgcggcctatgcggcgtgccgggcgctggggctgtcgcccagggtcatc
gagcaggggttccacagtttcgagggcctgccgcatcgcagccaggtgattgccgagaag
aatggcgtgaccttcgtcaatgacagcaaggcgacgaatgtcgactcggcgctgaaggcg
ctggaggcgttttcgagcatccgctggatctgtggggggctggagaaggaaggcggcgtt
ggcgggctgaagccggggcttgcgaacgtggtgaaggcctatgtcatcgggcgggaggcg
gcggaattcgccatgcagctcgagggtgtgggcgccgaggtctgcaccacgatggcggcg
gcggtggcgcaggcgatggacgaggcgcagccgggcgatacggtgctgctcgcgccggcg
gcggcgagtttcgaccagtacgacaatttcgagaaacgcggcgaggacttcatcgccgag
gtgcaggcgcggcttcaggcgggcctttag
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