KEGG   Rhizophagus irregularis: OCT59_001914
Entry
OCT59_001914      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
rie  Rhizophagus irregularis
Pathway
rie03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    OCT59_001914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rie03019]
    OCT59_001914
Messenger RNA biogenesis [BR:rie03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     OCT59_001914
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_SCAP eIF2A Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N LisH_WDR26 NBCH_WD40 Beta-prop_NOL10_N Beta-prop_WDR41 CSTF1_dimer Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C TIG BKRF4 E3_UBR4_N
Other DBs
NCBI-GeneID: 36866394
NCBI-ProteinID: XP_025181486
LinkDB
Position
10:1854343..1857478
AA seq 428 aa
MEEQQSLDREDVLSLITSQLRYYGYTEIAQTLTEESNIPMDQNASTELSDLLYAATYSSK
DEDEDDDDDDEYDIPVIVDDISYSDDEIQSEDIPTKHLTEIDPETNHEPKQTPNYNLWYI
TTHRAAATCVRFKKDGKFAATGSADSSLKVLDTSKMKSHSDEDRPVIRTLYDHTGRVNDL
SFHPNGLTLASCSDDRNIKLFDIATQGIKRSFRFLRDKYPVRSIDFHPTGEYMLAGTDHE
AIRFWDVQNIKCYIPSNSQSNHRLSITKVRWNSNGGKFVTSSLDGSIKIWEGENGDCIQT
IDNAHSGQAVSSVEFSKSGAYVLSSGCDSTSKLWDANNGKCIVTYEGAVHRNNHVQSTFL
CEEDYVISSDESDNSIICWDSRTGKLLTRWSGHTGIVRYVAASPTESGFMSCGDDFRVRY
WNLDPMQS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggaagaacaacagagtttggatcgtgaggatgtcctctctttaatcactagtcaatta
cgttattatggatatacagagattgctcaaactttaacagaagaatcaaatattcctatg
gatcaaaatgctagtacagaattatctgatttactttatgctgcaacatattcgtcaaag
gatgaagatgaagatgatgatgatgatgatgaatatgatattcctgtaatagttgatgat
atatcttattctgatgatgaaatccaaagtgaagatatcccaacaaaacatttaactgaa
atagatcccgaaacgaatcatgaaccgaaacagactccaaattataatctttggtatata
acaactcatcgagctgcagccacatgtgtaagatttaagaaagatggaaaatttgcggct
actggttcggctgattcatcacttaaggttcttgatactagcaagatgaaaagtcattca
gatgaagataggcccgttataaggactttatatgatcatactggtcgtgtaaatgattta
tcatttcatccaaatggacttacattggcttcatgttcggatgatcgtaatataaaatta
tttgatattgcaacacaaggaattaaacgatcatttcgatttttacgggataaatatcca
gtcagatctattgattttcatcctaccggagaatatatgctagcaggtaccgatcatgag
gctatcagattttgggatgttcaaaatattaaatgttatattccatctaattcacaatcc
aatcatagattaagtataactaaggttcgatggaattcaaatggtgggaaattcgttact
tcttcacttgatggtagtataaagatatgggaaggagaaaatggagattgtattcaaacg
atagataatgctcatagtggacaagcagtttcaagtgtagaattttccaaatctggggca
tatgtactttctagtggttgcgattctacatccaaattatgggatgctaataatggaaaa
tgtattgtaacttatgaaggggctgttcatcgaaataatcatgtacaatctacttttttg
tgtgaagaagattatgttattagtagtgatgaaagtgataattctataatttgttgggat
tcacgtactggaaaattacttacacgttggtctggtcacacaggaattgttagatatgtt
gccgcttcacctacagaatcaggatttatgagttgcggggatgattttcgcgttaggtat
tggaatttggatccgatgcaatcttaa

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