Rhizophagus irregularis: OCT59_018588
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Entry
OCT59_018588 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
rie Rhizophagus irregularis
Pathway
rie04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
OCT59_018588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_018588
Membrane trafficking [BR:
rie04131
]
Endosome - Golgi transport
Others
GGA
OCT59_018588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
GGA_N-GAT
Spectrin_Anc-1_2
cpSF2-GREB1
GASH
SPOUT_MTase_2
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
36864468
NCBI-ProteinID:
XP_066004754
LinkDB
All DBs
Position
27:complement(3207527..3209811)
Genome browser
AA seq
391 aa
AA seq
DB search
MSFGTLQLPSVIPKPTIQAIIERACNPQLGEPDLALDLEIADLINQKKQNYPREAAMHIV
RLINNRNPNVASLALTLLDICVKNCGHAFHLHIATKEFLNEIVRKFPERPPALLNPIQLR
ILEFIQEWRSTICVNSRHKDDLVHINDMYRLLSYKGYIFPEIDTQSAAVLNPTETLKSPD
ELEQEDRAAQAAKLQELIRRATPADLEEANELMKVMAGYDPEAKPDYKKQTNEELEKIQR
KTILLNDMLNNVKVGERIGVSDIFEELSQACKVVQPKIQKFIEEEVDSESIDRLLNLNDL
INTVLKRFEDTKNGIFEPPEEKPQPPPQSSSTTNESTSESLLIDFGNPDPPQGQIQITDD
LLELNGSSNNKPSSEKGTGNAIDDLLGLSFN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgggacactccagttaccttccgtaattcctaagcctacaattcaagctatc
atagagagggcatgtaatcctcaattgggtgaaccagatctagcattggatttggaaatt
gcagatttgatcaatcaaaaaaagcaaaattatccacgagaagctgctatgcatattgtg
agactaataaataatagaaatccaaatgttgcatcgttagctttgacgttattggatatt
tgtgtaaaaaattgtgggcatgcttttcatttacatattgcgacaaaagaatttcttaat
gaaattgttcgaaaattccctgaaagaccaccggccttactgaatccaatacagttgaga
attttggagttcatacaggaatggagatcaactatatgtgttaattcacgtcataaggat
gatcttgttcatattaatgacatgtatagattgctaagttataaaggttatatatttccg
gaaatagatactcaatctgcagcggtcctcaatccaacagagactttgaagtctccagac
gaacttgaacaagaggatcgtgctgcgcaagcagcgaagttacaagagttaattagaaga
gctactccagcagatttagaagaagctaatgaacttatgaaggttatggctggatatgac
cctgaagctaaacctgattataagaaacaaactaatgaagaattggagaaaattcagaga
aagactatacttttaaatgatatgcttaataatgttaaagttggtgaaaggataggtgtt
agtgatatatttgaggaattatctcaggcctgtaaagttgtgcaacctaaaattcagaaa
tttattgaagaggaagttgatagtgagagcattgatcgtctattaaacttgaatgatctg
attaatacggtattgaaaagatttgaagatacaaagaatggaatattcgagccgcctgaa
gaaaagcctcagccgccaccgcaatcatcatcaaccacaaatgaatccacttcggaatcc
ttgttaattgatttcggaaatcccgacccaccacaaggtcaaattcaaattactgatgat
ttgctagagttaaatggaagttctaataacaaaccttcttctgaaaaaggaacaggaaat
gctatcgatgatttacttggattatcttttaattga
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