Rhizophagus irregularis: OCT59_021730
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Entry
OCT59_021730 CDS
T10295
Name
(RefSeq) chaperone ATPase hsp78
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rie03110
]
OCT59_021730
Chaperones and folding catalysts [BR:
rie03110
]
Heat shock proteins
HSP100
OCT59_021730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
AAA_14
AAA_23
nSTAND3
AAA_7
AAA_18
RuvB_N
ABC_tran
IstB_IS21
NACHT
AAA_24
DNA_pol3_delta2
T2SSE
Zeta_toxin
ATP_bind_1
NBD_SMAX1
Torsin
Spc42p
Motif
Other DBs
NCBI-GeneID:
36867723
NCBI-ProteinID:
XP_025178259
LinkDB
All DBs
Position
30:complement(1389537..1392891)
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AA seq
693 aa
AA seq
DB search
MIRLSRRTKNNPVLIGEAGVGKTAIAEGLAQRIINGEVPESIKDKKVIALDLGSIIAGSK
FRGEFEDRLKTILREVQESEGKLILFIDELHNLLGLGKAEGSIDAGNLLKPALARGTLRC
CGATTIDEYRKYIEKDPALARRFQSVMVVEPTVEDTISILRGLKERYEVHHGVRIADSAL
IAAATYSHRYITDRFLPDKAIDLIDEACSKLRLQQESKPEAIENLDRQIITLRIEMESLR
KETDPISKERREKLQKELDEKQKESDKLNLLWQEERAKLGEIKSIKSQLEQARIELEASQ
RQGNFTRASELRYGIIPDLEKKLPQDREEEGSESLIHERVTADDIGAVVSRMTGIPIHNL
LRSERDRLLHIEEKLSQRVIGQDEAIKAVSEAIRLSRAGLQSPSRPIASFLFLGPTGVGK
TELCKAIAEFLFDTESSIVRVDMSEYMEKFAVSRLVGAPPGYVGYEEGGELTEAIRRKPF
AVVLLDEMEKAHRDVANLLLQILDDGFITDSQGRKVDFRNTIIIMTSNLGADVLAASDIT
EGGKVSDLTKSAVLDIVRRHFPPEFVNRIDDMVVFNRLTRMALRDIVDVRLREVQVRLKD
KHIKVDVDEHAKAWLAEKGYDPVYGARPLNRLIQKKILNPLAMCLIEGSIKNHEPARIRT
VKVASNEEDLIIEKNHEVSTNPSKSGIDEFNED
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatcagattgtcccgacgaacaaaaaacaatcctgtgttaattggcgaagctggtgtt
gggaaaactgcgatcgcagaaggccttgcccaaaggattataaatggtgaagttcctgaa
agtatcaaagacaaaaaagttatagctttagatcttggttctatcatagctggttcaaaa
tttaggggcgaatttgaagatcgtctcaaaactatattgcgtgaagttcaggagtccgaa
ggaaagctaattctatttattgatgaattacacaatttacttggactgggaaaggctgaa
ggttcaatagatgctggaaatttgcttaagcctgctttggcaagaggaaccttaagatgt
tgtggtgcaactaccattgacgaatatcgcaagtatatcgagaaggacccggctttggcg
cgtagatttcaatcagttatggttgtagaaccaaccgttgaagatacaatttcaattcta
cggggtcttaaagaaagatatgaggttcatcatggagtccgcattgcggattcagctttg
attgccgctgccacatattctcatcgatatataactgataggttccttcctgataaggcc
attgatctaatcgacgaagcgtgctcaaaacttcgtcttcaacaagaaagtaagcctgaa
gcaatcgaaaatcttgacaggcaaataattactcttcgcatagaaatggaatcattgagg
aaggagacagatccaatatctaaagagcgtagagagaaactacaaaaagaactggatgaa
aaacaaaaagaatcagacaagcttaatttactttggcaggaagaaagagctaagttgggt
gaaataaaaagtattaaatctcaattagagcaagcaagaatagaactagaagcatcccaa
agacaaggcaatttcacccgagctagtgaattgcgttacggcattattccagacttagag
aaaaagcttcctcaagatcgtgaagaagaaggttccgaatcactaatacatgaacgagtt
acagctgatgatattggagcagtagtatctcgaatgacgggtattcccattcataacttg
ttacgaagtgaaagggataggttacttcatattgaggaaaaactttcacaacgcgttatt
gggcaggacgaagcgataaaagctgtttcagaggcaataagactaagtcgtgcaggctta
caaagtccctccagaccaatcgcctcattcttatttctgggaccaaccggtgttggaaag
acggagttatgtaaagcgattgcagagtttttatttgatacagagtcttctattgtgcgc
gtagatatgagtgaatatatggagaaatttgcagtatcgagattagtcggcgctccacct
ggctatgttgggtatgaagagggaggtgaacttactgaggctattcgaagaaaaccattt
gctgtcgttcttctggatgagatggaaaaggcacatcgagacgtcgccaaccttttactt
caaattttggatgatggttttattactgattctcaaggccgaaaggtagattttcgaaat
accattatcattatgacaagtaatcttggtgcagatgttttggcagcatcagatatcacg
gaagggggaaaagtaagcgatttgactaaatctgctgttttagatattgttagaaggcat
ttcccaccagagtttgttaatcgaatagatgatatggttgtcttcaaccgtcttactcgt
atggctttaagagatatcgttgacgtacgtttacgagaagttcaagtgcgtctaaaggat
aaacatattaaagtcgacgtagatgaacatgctaaagcttggttagccgaaaaaggatat
gatcctgtatatggtgcaagaccacttaacagattaatacagaagaaaatacttaatcca
ttggctatgtgtttaatagagggatctatcaaaaatcacgagcctgcccgaatcaggaca
gtgaaagtagctagtaatgaagaagatttgattattgagaaaaatcacgaagtatcaaca
aacccatctaaaagtgggatagacgagtttaatgaagattaa
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