KEGG   Rhizophagus irregularis: OCT59_022420
Entry
OCT59_022420      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12827  splicing factor 3A subunit 3
Organism
rie  Rhizophagus irregularis
Pathway
rie03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OCT59_022420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rie03041]
    OCT59_022420
Spliceosome [BR:rie03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    OCT59_022420
 Complex B
    OCT59_022420
 Complex C
   U2 SnRNP specific factors
    OCT59_022420
SSDB
Motif
Pfam: SF3a60_Prp9_C SF3A3 SF3a60_bindingd zf-met zf-C2H2_jaz zf-C2H2_2 ApbA_C
Other DBs
NCBI-GeneID: 36880831
NCBI-ProteinID: XP_025174275
LinkDB
Position
31:complement(1472477..1474684)
AA seq 488 aa
MESILEQQRKAHEEIERLEQAIVDQFIKETKSVGLQHKERLIREHRVSDFLDRISSRSKF
LHELYEDTDGARKTEIDALSGTSEFSEFYGRLKAIKDYHRRYPNETVEPLELEFINQSKQ
NGDDDEIDKLFSGEEGSGRFLDLHALHEQYVNLKNFKKTDYLTYLSEFDHFSDYPKEHKY
NGEYLKYLKELKNYLESFFKRVKPLSNLDDIRNEAEREFNEKWAQGKVHGWEKQIGADDD
STDLFCVACKKAYSKKTVYDAHLKSKKHIKSAKSMIEKGITSVDSETYEKLKKEVDEGKD
KREKEIAFTEALIQKYAEVLGSQREDTKANVERKRALTDRERRMELETEEVDDVESESED
EDKIYNPLKLPLGWDGKPIPYWLYKLHGLGVEYPCEICGNYVYMGRKAFDRHFQEWRHAH
GMRCLGIPNTRHFHEITLIEDAYALWEKLKSTGKTDEFKADTMEEFEDQEGNVFNKKTYD
DLKRQGLL
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggaaagcatcttagaacaacaaagaaaagctcatgaagaaattgaacgtttagaacaa
gctattgtagatcaatttattaaggaaacaaaatctgttggtttgcaacataaagaaaga
ttaatacgagagcatagagttagcgatttccttgatagaattagttccagaagtaaattt
ttacacgagttatatgaggatactgacggagcacgaaaaactgaaatcgatgctttatct
ggtacttcagaatttagtgaattttacggtagattgaaagcaattaaagattatcataga
agatatcctaatgaaactgttgaacctttggaattggaatttattaatcagtctaaacaa
aatggagatgatgatgaaattgataaacttttttcgggtgaagaagggagtggtcgtttt
ttagatttacatgctcttcatgaacaatacgtaaatttaaaaaattttaaaaaaactgat
tatttaacttatttaagtgaatttgatcacttttcggattatccaaaagaacataaatat
aatggagaatatctcaaatacttgaaagaattgaaaaattatttagagagttttttcaaa
agggttaaaccgctttctaatttagacgatataaggaatgaggctgaaagagaatttaat
gaaaaatgggcacaaggcaaagttcatgggtgggaaaaacaaattggtgcagatgatgat
tctactgatttgttttgcgtggcatgtaaaaaagcttattcaaaaaagactgtatatgat
gctcatttgaaaagtaaaaaacatataaaatccgcaaaatcaatgatagagaaaggaatt
acatcagtagattcagaaacgtatgaaaaattaaaaaaagaagtagatgaaggaaaagat
aaacgtgaaaaagaaattgcatttactgaagcattgatacaaaaatacgctgaagtttta
ggttctcaacgtgaagatactaaagccaatgttgaaagaaaacgagctttaactgatcgt
gaacgaagaatggaattagagacggaagaagtggatgatgtagaatcagaatcagaagat
gaagataaaatttacaatccacttaaattacctcttggttgggatggtaagccaattcca
tattggctttataaattacatggtcttggtgttgagtatccatgcgaaatttgtggcaat
tacgtatatatgggaaggaaagcattcgataggcattttcaagaatggagacatgctcat
ggaatgagatgtttgggaatacctaacacccgtcattttcatgaaattacattaatcgaa
gatgcttatgctttatgggagaaactcaaaagtacgggtaaaactgatgaatttaaagca
gatacgatggaagaatttgaggatcaagagggaaatgtatttaataaaaagacttacgac
gatttaaagagacaaggattattataa

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