Rhizobium indigoferae: U5G49_004404
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Entry
U5G49_004404 CDS
T09660
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00260
Glycine, serine and threonine metabolism
rif00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif01230
Biosynthesis of amino acids
Module
rif_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U5G49_004404 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
U5G49_004404 (trpB)
Enzymes [BR:
rif01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
U5G49_004404 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
WQN39218
UniProt:
A0ABZ0ZI30
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Position
4484496..4485716
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AA seq
406 aa
AA seq
DB search
MNETPKPNSFRSGPDEDGRFGIYGGRFVAETLMPLILDLQDEWNRAKNDPAFQAELKHLG
AHYIGRPSPLYFAERLTAELGGAKIYFKREELNHTGSHKINNCIGQILLAKRMGKTRIIA
ETGAGQHGVASATVAARFGLPCVVYMGATDVERQAPNVFRMKLLGAEVKPVTAGSGTLKD
AMNEALRDWVTNVEDTYYLIGTAAGPHPYPEMVRDFQSVIGIEAKEQMLAAEGRLPDLVI
AAVGGGSNAIGIFHPFLDDPSVKIVGVEAGGKGLQGDEHCASITAGSPGVLHGNRTYLLQ
DGDGQIKEGHSISAGLDYPGIGPEHSWLNDTGRVDYVPIMDHEALEAFQTLTRLEGIIPA
LEPSHAIAEVIKRAPTMGKDEIILMNLSGRGDKDIFTVGKILGMGL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagacgcctaaaccgaattccttccgttccggccccgatgaagatggccgtttc
ggcatttatggcggtcgtttcgtcgccgaaacattgatgccgctgatccttgatctgcag
gacgagtggaacagggcaaagaacgatccggcattccaggccgaattgaagcatctcggc
gcgcattatatcggccgcccgagcccgctctatttcgccgagcggctgacggccgaactc
ggcggcgcgaagatctatttcaagcgcgaggagctgaaccataccggctcgcacaagatc
aacaactgcatcggccagatcctgctcgccaagcgcatgggcaagacccgcatcatcgcc
gaaaccggtgccggccagcacggcgtcgcctccgcaaccgttgccgcccgctttggcctt
ccctgcgtcgtctatatgggcgccaccgatgtcgagcgtcaggcgccgaacgttttccgc
atgaagctgctcggcgcggaggtcaaaccggtcaccgcaggcagcggcacgctgaaggac
gccatgaacgaggcgcttcgcgactgggtcaccaatgtcgaggatacctattacctgatc
ggaacggcagccggtccgcatccctatccggagatggtccgcgatttccagtcggtgatc
ggtatcgaagcgaaagagcagatgctggcagccgaaggccgcttgccggatctcgtcatc
gctgccgtcggcggcggctcgaacgccatcggcattttccatcctttcctggatgatccc
tctgtgaagatcgtcggcgtcgaagccggcggcaagggtctgcagggcgacgagcattgc
gcctcgatcaccgccggttcgcccggcgtgctgcacggcaaccgcacctatctgctgcag
gatggtgacggtcagatcaaggaaggccattcgatttcggccggtctcgattatcccggc
atcggtcccgaacattcctggctgaacgataccggccgtgtcgactatgtgccgatcatg
gaccacgaagcgctcgaggctttccagacgctgacccgcctcgaaggcatcatcccggcg
ctcgagccctcgcatgccattgccgaggtgatcaaacgcgcaccgacgatgggcaaggac
gagatcatcctgatgaacctctccgggcgaggcgacaaggatatcttcaccgtcggcaag
attctcggaatgggactgtaa
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