Rhizobium indicum: FFM53_005005
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Entry
FFM53_005005 CDS
T07009
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rii
Rhizobium indicum
Pathway
rii00190
Oxidative phosphorylation
rii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FFM53_005005
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFM53_005005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rii03019
]
FFM53_005005
Enzymes [BR:
rii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FFM53_005005
Messenger RNA biogenesis [BR:
rii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FFM53_005005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
PLDc
Motif
Other DBs
NCBI-ProteinID:
QKK15785
UniProt:
A0ABX6P9P9
LinkDB
All DBs
Position
complement(1014005..1016209)
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AA seq
734 aa
AA seq
DB search
MDSAVAEHQELTPEINDNTPPLEELLKSPERFINREFSWLQFNRRVLEETLNTEHPLLER
VRFLSISAANLDEFFMVRVAGLEGQVRQNIAIRSPDGKTPAEQLDSILQEIDHLQMEQQA
SLAVLQQYLAKEDILIVRPGALSEGDRQWLAAEFEQAIFPVLTPLSIDPAHPFPFIPNLG
FSIGLQLVSKNGREPMTALLRLPVALDRFVRLPDDGNTIRYITLEDVANIFIHRLYPGYE
VQGSGTFRVIRDSDIEVEEEAEDLVRFFETALKRRRRGKVIRIETDSEMPASLRQFVVQA
LNIPDNRVAVLPGLLALNTLSEITKAPRDDLRFPSYNARFPERVREHAGDCFAAIREKDM
VVHHPYESFDVVVQFLLQAARDPDVLAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVE
LKARFDEEANIRWARDLERAGVQVVFGFIELKTHAKMSLVVRREDGKLRTYCHLGTGNYH
PITAKIYTDLSYFTCNPVIAHDMANIFNFITGYGEPEEGMQLAISPYTMRSRILRHIEEE
VQHARNGAPAAIWMKMNSLVDPDIIDALYRASHAGVEIDLVVRGICCLRPQVPGLSEKIR
VKSIVGRFLEHSRIFCFGNGHGLPSDKALVYIGSADMMPRNLDRRVETMVPLTNPTVHEQ
VLSQIMLGNVIDNQQSYEILPDGTSRRMEVRRGEEPFNAQQYFMTNPSLSGRGEALKSSA
PKLIAGLLEGRNNK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgcagtcgcagaacatcaggaactcactccggaaatcaacgacaacaccccc
ccgctggaagagctgctcaagagccccgagcgcttcatcaaccgagaattctcctggctg
cagttcaaccgccgtgtcctggaagaaactttgaataccgagcatccgttgctcgagcgt
gtccgcttcctgtcgatctcggccgccaacctcgatgaattcttcatggtgcgtgtcgcc
ggcctcgagggccaggtacgccagaatatcgccatccgcagcccggacggcaagacgccg
gccgagcagctcgactcgatcctgcaggagattgaccatctgcagatggagcagcaggcc
tcgctcgccgtgctgcagcaatatctcgccaaggaagacatcctgatcgtgcgccccggc
gccttgagcgagggcgaccgccagtggctggccgccgaattcgaacaggcgatcttcccc
gtgctgacgccgctgtcgatcgatcccgcccatccgttccccttcattccaaatctcggc
ttttcgatcggtctgcagctcgtcagcaagaacggccgcgagccgatgacggcgctgctg
cgcctgccggtggcgctcgaccgcttcgtccgcctgccggatgatggaaacacaatccgc
tacatcacgctggaagatgtcgccaacatcttcatccatcggctctacccgggttacgag
gtgcagggctccggtacgttccgagtcatccgcgacagcgatatcgaagtcgaggaagag
gccgaggatctcgtccgcttcttcgaaacggcgctgaaacgccgccgccgcggtaaggtc
atccgcatcgagaccgactcggaaatgccggcctcgctgcgtcagttcgtcgttcaggcg
ctcaatatccctgataatcgcgtcgccgttctgcctggtcttctggcgctgaacaccctg
tctgagatcactaaggcgccccgcgacgatctgcgctttccctcctacaatgcgcgattt
cccgagcgcgtccgcgaacatgccggcgactgcttcgccgccatccgcgaaaaggacatg
gtcgtccatcacccctacgaatccttcgacgtggtggtccagtttcttctccaggctgcg
cgcgatcctgacgtcctggcgataaagcagacgctttaccgcacctccaacgacagcccg
atcgttcgcgcgctgatcgatgccgccgaagccggcaagtcggtgacggcgctggtcgag
ctcaaggcccgcttcgacgaagaggcgaacatccgctgggcgcgcgacctcgagcgtgcc
ggcgtccaggtcgtcttcggcttcattgagctcaagacccacgccaagatgtcgctggtc
gtccgtcgcgaggatggcaaactgcgtacctattgccatctcggcaccggcaactatcac
ccgatcaccgcgaagatctataccgatctctcctacttcacctgcaatcccgtcatcgcc
cacgacatggcgaacatcttcaacttcatcaccggctacggcgagccggaagagggcatg
cagctcgccatctcgccctatacgatgcgctcgcgcatcctgcgtcacatcgaggaagag
gtccagcacgccaggaacggtgcaccggcggcgatctggatgaagatgaattcgcttgtc
gatcccgacataatcgacgcgctctatcgcgccagccatgccggcgtcgagatcgatctc
gtcgtgcgcggcatctgctgcctgcgtccgcaggtgcctggcctttcggaaaagatccgc
gtcaagtcgatcgtcggccgcttcctcgaacacagccgcatcttctgcttcggcaacggc
cacggcctgccgtccgacaaggcgctggtttacatcggctcggccgacatgatgccgaga
aaccttgatcgccgcgtcgaaaccatggttccgctgacgaatcccaccgttcacgagcag
gtcttgtcacagattatgcttggcaacgtgattgacaatcaacaaagctacgagatattg
cccgacggtacgtcgcgtcgcatggaagtgcgcaggggcgaagaaccgttcaacgcgcag
cagtatttcatgaccaatccgagcctgtccggccgtggtgaagctctgaagtccagtgcg
ccgaagctgatcgccggcctgctcgaaggccgcaacaacaagtaa
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