Roseburia intestinalis M50/1: ROI_00800
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Entry
ROI_00800 CDS
T02598
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00260
Glycine, serine and threonine metabolism
rim00460
Cyanoamino acid metabolism
rim00630
Glyoxylate and dicarboxylate metabolism
rim00670
One carbon pool by folate
rim00680
Methane metabolism
rim01100
Metabolic pathways
rim01110
Biosynthesis of secondary metabolites
rim01120
Microbial metabolism in diverse environments
rim01200
Carbon metabolism
rim01230
Biosynthesis of amino acids
rim01240
Biosynthesis of cofactors
rim04981
Folate transport and metabolism
Module
rim_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROI_00800
09102 Energy metabolism
00680 Methane metabolism
ROI_00800
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROI_00800
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ROI_00800
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ROI_00800
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ROI_00800
Enzymes [BR:
rim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ROI_00800
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CBL07438
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Position
71243..72484
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AA seq
413 aa
AA seq
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MYTLEDIQAVDMEVANAITDEFERQNSHIELIASENWVSKAVMSAMGSVLTNKYAEGYPG
KRYYGGCECVDVVEELARERAKELFGCEYANVQPHSGAQANMAVQFAILKPGDTVMGMNL
DHGGHLTHGSPVNFSGTYFHIVPYGVNDEGFIDYDKVEEIAMECKPKMIIAGASAYARTI
DFKRFREIADACGAVLMVDMAHIAGLVAAGLHPSPIPYAHVVTTTTHKTLRGPRGGMILS
SQEIADKYNFNKAIFPGIQGGPLMHVIAAKAVCFKEALQPEFKVYQQNIIDNAQALCKGL
LSRDIKIVSGGTDNHLMLVDLTNYDQTGKAVEKLLDSVNITCNKNTIPNDPKSPFVTSGV
RLGTPAVTSRGLNTEDMDQIAEAIAMMIKEGEPAADKACAIVKSLTEKYPLER
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtatacactggaagatattcaggcagttgatatggaagtggcaaatgccatcaccgat
gaatttgaacgtcagaacagtcatattgagctgattgcatccgaaaactgggtaagcaag
gcagtgatgtcggcgatgggcagtgttcttacaaataaatatgcagaaggttatccgggg
aaaagatattacggcggatgtgagtgtgtggatgttgtagaggaacttgcaagagagcgt
gcgaaagagctgtttggctgtgagtatgcgaacgtacagccacattccggtgcacaggcg
aatatggctgtacagtttgccatcttaaaaccgggtgacacggtcatgggaatgaactta
gatcacggcggacatttgacacacggaagccctgtaaacttttccggtacttattttcac
attgtaccttacggtgtcaatgacgagggatttattgattatgacaaagtagaagagatc
gcgatggagtgcaagccgaagatgatcatcgcaggtgcaagtgcttatgcgagaaccatt
gatttcaagagattccgtgagatcgcagatgcatgcggagcagttctgatggtcgatatg
gcacatatcgcaggacttgtcgctgcaggacttcatccaagcccaatcccgtatgcacac
gttgtcacaaccacaacacacaagacactgcgtggaccgcgtggaggtatgatcttatcc
agtcaggaaatcgcagacaaatataactttaacaaagctattttccctggaatccagggc
ggacctttgatgcatgtgatcgcagcgaaagcagtctgctttaaggaggcacttcagccg
gagtttaaagtataccagcagaatatcattgacaatgcacaggcactctgcaagggactg
ttaagccgtgatattaaaatcgtatccggcggtacagacaatcacctgatgcttgttgat
ctgacaaattatgatcagaccggaaaggcagtggagaaacttctcgattctgtcaatatt
acctgcaacaagaatacgatcccgaacgatccgaaatccccattcgtaacaagcggtgta
cgtcttggaacgccggcagttacttcccgtggactaaacacagaggatatggatcagatt
gcagaggcaatcgccatgatgatcaaggagggtgaaccggcagctgataaagcgtgtgca
atcgtaaaatcgctgacagagaaatatccgctggagagataa
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