Roseburia intestinalis M50/1: ROI_03000
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Entry
ROI_03000 CDS
T02598
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
ROI_03000
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
TBCC_N
HEF_HK
CGGC
CCDC22_N
Lig_chan-Glu_bd
MinE
Motif
Other DBs
NCBI-ProteinID:
CBL07620
LinkDB
All DBs
Position
276403..278037
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AA seq
544 aa
AA seq
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MAETAKKISMIPAKVQYDRNVKLSEKKMKVAAYCRVSTELEEQDSSYEAQVEYYTSKISE
NENWKNAGIYADDGKSGTNTKKRADFNAMIQDALAGKIDMILTKSVSRFARNTVDSLVTI
RKLKEKNVAVVFEKEGINTLEGTGEILITILSSLAQEESRNISENIRWGVVRKFEKGKVI
VNCTKFMGYTKNEDGDLVIVPEEAEIVKLIFRLYLEGYSTGKIAKHLEEQGIKTATGQDK
WHSTVIDKMLRNEKYMGDALLQKTYTVDFMTKKKVKNTGLVPQYYVEDDHEAIIPKELFY
RVQEEMMRRASLCKAAVTRKKNQRSRYSSTYALTGMLICGKCGQEYRRVTWARNGKKKVV
WRCSNRLTNGVKKCGESETLEENALNRAVMEAIHRITSDDMEFMENFRQNIIHVIGNYST
AKESGEYEEKIKEKREEMVALIAENAKTGSYTPEFDERYRTIAEEINALKEAQKTARNEK
RMADSYEQRIQDIDHYLSTSTCQIPEFDNDLVRRLISTIKVESSEKLLIQFQSGIVMEKE
IRYE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacagcaaaaaagatcagcatgatacctgccaaggtgcagtatgaccggaat
gtgaaactgtcagagaagaaaatgaaggtcgctgcctattgccgtgtcagtacggaactg
gaagagcaggacagcagctatgaggcacaggtggagtattataccagcaagatatccgaa
aacgaaaactggaaaaatgccggcatttatgcggatgacggaaagagtggaacaaacacc
aaaaagagggcagactttaatgccatgatacaggatgcccttgccggaaagatcgacatg
atccttacaaagtcggtcagcaggtttgcgaggaacacggtagactcgctggtgaccatc
cgaaaactgaaggaaaagaacgtggcggtggtgttcgagaaagaggggatcaatacactg
gagggaaccggcgaaatccttatcaccatcttgagcagtctggcacaggaggagagccgc
aacatcagcgagaacatccgctggggagtcgtgaggaaatttgaaaaaggcaaggtcatc
gtaaactgcacaaagttcatgggatacaccaaaaacgaggacggggacttggtcatcgta
cccgaagaggcagagatcgtaaagctgatcttccgcctttatctggagggctacagtact
gggaagatcgcaaagcatctggaagagcagggcatcaagaccgccacagggcaggacaaa
tggcattccacggtaatagacaaaatgctccgcaatgaaaaatacatgggagatgcactc
ctgcagaaaacctacacggtggatttcatgacaaaaaagaaagtcaagaacaccggactc
gtaccgcagtattatgtggaagatgaccatgaggcgatcataccgaaagaactgttctac
agggtgcaggaagagatgatgcggagggcatccttatgcaaggcggctgtcacccggaag
aaaaaccagaggagcaggtattcctccacctatgcactgaccggcatgctgatctgcgga
aaatgcggacaggagtaccggagggtcacctgggcgagaaacgggaaaaagaaagtggtc
tggagatgcagcaaccggctgaccaacggagtgaagaaatgcggggaatccgagacactc
gaagagaacgcattaaacagggcagtgatggaagccatccacaggatcacgagtgatgat
atggaatttatggaaaacttccggcagaacatcatccatgtcatcgggaactacagcacc
gcaaaagagtccggggaatatgaagaaaagataaaagaaaagcgggaagagatggtggca
ctgatcgcagagaatgcaaagaccggctcctacacaccggagtttgatgaacgctaccgc
accatagcagaggaaatcaatgccctaaaagaggcacagaaaacagccagaaacgagaaa
cggatggctgacagctatgaacagagaatccaagatattgaccattatttaagcacaagc
acctgccagataccggagttcgacaatgaccttgtcagacggctgatctcgaccatcaaa
gtggaatccagcgagaagctgctgatacagttccagtcaggcattgtcatggaaaaggag
attcgatatgagtaa
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