Roseburia intestinalis M50/1: ROI_10140
Help
Entry
ROI_10140 CDS
T02598
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROI_10140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rim03400
]
ROI_10140
Enzymes [BR:
rim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ROI_10140
DNA repair and recombination proteins [BR:
rim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ROI_10140
Prokaryotic type
ROI_10140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBL08217
LinkDB
All DBs
Position
1014746..1015423
Genome browser
AA seq
225 aa
AA seq
DB search
MAMIMNDWLPAIQGEFKKPYYRELFQFVKEEYSRAVIYPPADDIFNAMHFTPLSEVKVLI
LGQDPYHNENQAHGLSFSVLPSQKEIPPSLQNIYKELQDDLGCYIPNNGYLKKWADQGVL
LLNTVLTVRAHQANSHQGRGWEQFTDAIIQAVNAQDRPIVYMLWGRPAQSKIPMLTNPKH
LILKAPHPSPLSAYRGFFGCRHFSQANDFLKANGIEPIDWQIENL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgattatgaatgactggctcccggcaattcagggagagtttaaaaagccatat
tacagggaactatttcaatttgtaaaagaagaatacagcagggcggtcatttatccgccg
gcagatgatatcttcaatgcgatgcattttacaccacttagcgaggtaaaagtactgatc
ttaggacaggatccgtatcacaatgagaatcaggcacatggtctgagcttttccgtacta
ccatcacagaaggagatcccgccatctctgcagaatatttacaaagagcttcaggatgat
ctgggatgctatattccgaacaacggatatttaaaaaaatgggcggatcagggcgtactg
cttttaaacacggtgctgactgtccgtgcacatcaggcgaattcccatcagggaagaggc
tgggagcagtttacggatgcaatcatacaggcagtcaatgcacaggaccggccaatcgta
tatatgttgtggggaagaccggcacagagcaagataccgatgctgacaaatccgaagcat
ctgattttaaaagcgccacatccaagcccactttctgcatacagaggtttttttggatgc
agacatttcagtcaggcaaatgatttcttaaaagcaaatgggatcgagccgatcgactgg
cagatcgaaaacctgtaa
DBGET
integrated database retrieval system
