Roseburia intestinalis M50/1: ROI_25960
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Entry
ROI_25960 CDS
T02598
Name
(GenBank) RNA polymerase, sigma subunit, RpsG/SigG
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rim03021
]
ROI_25960
Transcription machinery [BR:
rim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ROI_25960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_3
HTH_31
GerE
HTH_28
KORA
HTH_23
HTH_10
HTH_19
Trp_repressor
HTH_25
MOZ_SAS
Motif
Other DBs
NCBI-ProteinID:
CBL09549
UniProt:
D4KRP7
LinkDB
All DBs
Position
2614268..2615047
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AA seq
259 aa
AA seq
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MASYKVEICGVNTAKLPILKEEEKDALFARIKQGDTAARETYIKGNLRLVLSVIKRFSGN
HENVDDLFQIGCIGLIKSIDNFDPTIGVKFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRD
TAYKAIHTKEILSKTENKEPTLDEIAAESGISKEDIVFALDAIQSPLSLYDPVYTDGGDT
LYVMDQISDKKNREENWVEELSLNDALDRLNERENYILKLRFFEGKTQMEVADEIHISQA
QVSRLEKSALKSIRHYLSL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttataaagtagaaatctgcggcgtcaacaccgcaaaactccccattttgaaa
gaagaggaaaaagatgctctgtttgcacggatcaaacagggagataccgctgccagagaa
acttatatcaaaggcaatctcaggctggtattaagtgtcatcaaacgtttttccggcaat
cacgaaaatgtagatgatctgtttcagatcggctgtatcggcctgatcaagtccatcgac
aacttcgatccgacgatcggggttaagttttccacttacgcagttcccatgatcataggt
gagataagacgttacctgcgcgacaataactctatccgcgtcagccgttccctgcgcgac
actgcctacaaggcaatccacaccaaagaaatactctcaaagacggaaaacaaagagccg
actctcgacgaaattgccgccgaatccggcatttctaaagaggacatcgttttcgccctc
gatgccatccagagtcctctcagtctttatgacccggtctacaccgatggcggtgacaca
ctctatgtcatggaccagatcagtgacaagaaaaaccgggaagaaaactgggttgaagag
ctgtccctaaacgatgctctcgaccggttaaacgaacgcgaaaattatatcttaaagctt
cgcttttttgaaggaaaaacgcagatggaagtggctgacgagatccatatctcccaggct
caggtcagccgcttagaaaaatctgcgttaaaatccattcgtcattatctgtcgctctaa
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