Ralstonia insidiosa: ACS15_3404
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Entry
ACS15_3404 CDS
T04471
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rin
Ralstonia insidiosa
Pathway
rin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACS15_3404 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rin03021
]
ACS15_3404 (rpoB)
03400 DNA repair and recombination proteins [BR:
rin03400
]
ACS15_3404 (rpoB)
Enzymes [BR:
rin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACS15_3404 (rpoB)
Transcription machinery [BR:
rin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACS15_3404 (rpoB)
DNA repair and recombination proteins [BR:
rin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACS15_3404 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
UbiD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ANH73968
UniProt:
A0A192A0S9
LinkDB
All DBs
Position
1:complement(3452205..3456311)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIQSYAQFLQAETGPSQRKTEGLQAAFNAI
FPIASHNGLARMEFVSYHLSNPPFDVKECQQRGLTFHSALRAKVRLIINDRENPTKVKEI
KEQEVYMGEIPLMTDTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARII
PYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLKSEGA
LMEFVPERLRGEVARFDIADKNGKVVVEKDKRINAKHIRDLDSAGTKLISVPEDYLLGRV
LAKNIVDPDTGEVLANANDELTEGVLEKLRDADVKEIQTLYTNDLDQGPYISSTLRTDDT
ADQTAARIAIYRMMRPGEPPTEDAVEALFHRLFYSEDSYDLSRVGRMKVNSRLNRSEGTG
PMVLTDDDILDTIKLLVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVK
ERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPG
GLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAQLNDYGFLETPYRKVEN
GKLTDQVDYLSAIEEGKYVVAQANATVDENGNLIDELVSAREGSERETRMVTPDRVQYID
VAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRADKPLVGTGVERTVAVDSGT
AVQATRGGVVDYVDANRVVIRVNDAEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVKVG
DIVARGDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVMVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGVTRDKRAQSIIDEELK
RYRLDLNDQLRIVEGDAFQRLERLLVGKVANGGPKKLAKGTALTKEYLADLDKWHWFDIR
PSDDEVATQLEAVKEAIEQKRHDFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
RGLGERIGNMLKAQAKAAEVRKLLNQIYNESGKVEDLDSLSDAEILELAENLKKGVPFAT
PVFDGAHEDEIRRMLDLAYPEDIAKEKGLTASKQQVTLFDGRTGEAFERPVTLGVMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLERN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagctttaccgagaaaaagcgtattcgcaagagtttcgcgaagcgcgcaacg
gtccatcaggttcccttcctgcttgccacccagattcaatcgtatgctcagttcttgcag
gccgagaccggcccttcgcaacgcaagaccgaaggcctgcaggctgcattcaatgccatc
ttccccatcgcgtcgcacaatggtctggcgcgcatggagttcgtgtcgtatcacctgtcc
aacccgccgtttgacgtcaaggaatgtcagcagcgtggtctgaccttccactcggcgctg
cgcgcaaaagtgcgcttgatcatcaacgaccgcgagaaccccaccaaggtcaaggagatc
aaggagcaggaagtctacatgggcgaaattccgctcatgacggacaccggttcgttcgtg
atcaacggtacggaacgtgtgatcgtgtcccagctgcaccgctcgccgggcgtgttcttc
gagcacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcacggatcatt
ccgtaccgtggctcgtggctcgacttcgaattcgacccgaaggacatcctgtacttccgc
gttgaccgccgccgcaagatgccggtgacgatcctgctgaagtcgatcggcctgacgccg
gagcagatcctggcgcacttcttcgtgttcgacaacttcacgctcaagagcgaaggcgca
ctgatggagttcgtgcccgagcgcctgcgcggtgaagtcgctcgcttcgacattgccgac
aagaacggtaaggtcgtcgtcgagaaggacaagcgtatcaacgccaagcacatccgcgac
ctggattcggccggtaccaagctgatcagcgtgccggaagactacctgctgggccgcgtg
ctggcgaagaacatcgtcgacccggataccggtgaagtcctggccaacgccaacgacgaa
ctgaccgaaggcgtgctcgagaagctacgcgacgccgacgtgaaggaaatccagacgctg
tacacgaacgatctggaccagggtccgtacatctcgtccacgctgcgcacggacgatacc
gccgaccagaccgccgcgcgtatcgcgatctaccgcatgatgcgccccggcgagccgccg
accgaagacgccgtcgaagcgctgttccatcgcctgttctacagcgaagattcgtacgat
ctgtcgcgcgtgggccgcatgaaggtcaacagccgcctgaaccgctcggaaggtacgggc
ccgatggtgctgacggatgacgacatcctcgacacgatcaagctgctggtgaacctgcgt
aacggcaagggcgaagtggacgatatcgaccacctcggcaaccgtcgcgtgcgttgcgtc
ggcgaactggcggaaaaccagttccgcgccggtctgtcgcgcgttgagcgtgccgtgaag
gaacgtctgggccaggccgagacggaaaacctgatgccgcacgacctgatcaactcgaag
ccgatttcgtcggcgattcgcgagttcttcggttcgtcgcagctgtcgcagttcatggac
cagaccaacccgctgtcggaagtcacgcacaagcgtcgtatttcggcactgggcccgggc
ggtctgacgcgcgagcgcgcgggctttgaagtccgcgacgtgcacccgacccactatggc
cgtgtgtgcccgatcgaaacgccggaaggtccgaacattggtctgatcaactcgctggca
ctgtacgcgcagctgaacgactacggcttcctggaaacgccgtatcgcaaggtcgagaac
ggcaagctgaccgatcaggtcgattacctgtcggccatcgaagaaggcaagtacgtggtg
gcgcaggccaacgcgacggtggacgagaacggcaacctgatcgacgaactggtctccgca
cgtgaaggcagcgagcgtgaaacccgtatggtcacgccggaccgcgtgcagtacatcgac
gtggcaccgtcgcagatcgtgtcggccgcagcttcgctggtgccgttcctcgagcacgat
gatgcaaaccgtgcactgatgggcgccaacatgcagcgtcaggccgtgccttgcctgcgt
gcggacaagccgctggtgggtaccggcgtcgagcgcaccgtggcagtggactcgggtacg
gctgtgcaggctacccgtggcggcgtggttgactacgttgacgcgaaccgcgtggtgatc
cgcgtgaacgatgcggaagccgtggcgggtgaagtcggcgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatggtcaaggtgggc
gatatcgttgcccgcggcgacgtgatcgctgacggcgcctcgaccgacatgggcgagctc
gcgctcggccagaacatgctggtcgcgttcatgccctggaacggctacaacttcgaggat
tcgatcctgatctcggagcgcgtggtggcagaagaccgctacacctcgatccacatcgag
gaactgtcggtcgttgctcgcgacaccaagctcggaccggaagaaatcacgcgcgatatc
tcgaacctggctgaagcccaactggcgcgcctggacgagtcgggcatcacgtacatcggc
gcagaagtggaagccggcgacgtgatggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgtgcgatcttcggtgagaaggcgtccgacgtgaag
gacacttcgctgcgcgtgccgtcgggcatgagcggtaccgtgatcgacgtgcaggtcttc
acgcgtgaaggcgtgacgcgcgacaagcgcgcccagtcgatcatcgacgaagaactgaag
cgctaccgcctggacctgaacgaccagctgcgtatcgtggaaggcgatgccttccagcgt
ctggaacgtctgctggtgggcaaggttgccaacggcggcccgaagaagctggccaagggc
actgcgctcacgaaggaatacctggctgacctcgacaagtggcactggttcgacatccgt
ccgtcggatgacgaagtggccacccagctcgaagccgtgaaggaggccatcgagcagaag
cgccacgacttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgatcaagatggtcaaggtgtacctggccgtgaagcgtcgcctgcag
cctggcgacaagatggccggccgtcacggtaacaagggtgtcgtgtcgaagatcaccccg
atcgaagacatgccgtacatggctgacggtacgccggcagacatcgtgctgaacccgctg
ggcgtgccttcgcggatgaacgtgggtcagattctcgaaacccacctaggctgggccgca
cgcggtctgggcgagcgcatcggcaacatgctcaaggcgcaagccaaggctgccgaagtg
cgcaagctgctgaaccagatctacaacgagagcggcaaggtcgaagacctggacagcctg
tccgacgccgagatcctggagctcgccgagaacctgaagaagggcgtgccgttcgcgacg
ccggtgttcgacggtgcgcatgaggacgaaatccgtcgcatgctggacctcgcctatccg
gaagacattgcgaaggagaagggcctgaccgcttccaagcagcaggtcacgctgttcgac
gggcgcaccggtgaagccttcgagcgtccggtcacgctgggcgtgatgcacatgctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgaccggtccgtactcgctggtg
acgcagcagccgctgggcggtaaggcccagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcactcgaagcgtacggcgcgtcctacgtgctgcaggaaatgctgaccgtgaag
tcggatgacgtgaacggccggaccaaggtgtacgagaacatcgtcaagggcgagcactcg
atcgatgccggcatgccggaatcgttcaacgtgctggtgaaggaaatccgctcgctgggt
atcgacatcgacctcgagcgcaactaa
DBGET
integrated database retrieval system
