Rahnella inusitata: I2123_05500
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Entry
I2123_05500 CDS
T09790
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
riu
Rahnella inusitata
Pathway
riu02024
Quorum sensing
riu03060
Protein export
riu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
I2123_05500 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I2123_05500 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I2123_05500 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
riu02044
]
I2123_05500 (ffh)
Enzymes [BR:
riu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
I2123_05500 (ffh)
Secretion system [BR:
riu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
I2123_05500 (ffh)
Eukaryotic Sec-SRP protein
I2123_05500 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
NAT10_TcmA_helicase
AAA_31
AAA_30
AAA_16
KTI12
nSTAND_NTPase5
YqeC
AAA_33
AAA_14
APS_kinase
T2SSE
Fe-ADH
AAA_24
ATP_bind_1
ABC_tran
TsaE
Fe-ADH_2
NACHT
VirC1
Thymidylate_kin
AAA_17
AAA_28
AAA_19
Sigma54_activ_2
Rad17
KAP_NTPase
DUF5407
Motif
Other DBs
NCBI-ProteinID:
QUT16262
LinkDB
All DBs
Position
1172797..1174158
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLSDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKESAV
GVEVNKSLTPGQEFVKIVQKELENAMGEANTELNLAAQPPAVVLMAGLQGAGKTTSVGKL
AKFLKEKKKKKVLVVSADVYRPAAIKQLETLAQQVEVDFFPSDAQEKPVDIVRRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGMGEKTDALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLTDFLDQLKQMRNMGGMANMMSKLPGVGQL
PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAMGSGMQVQDVNRLLKQF
DDMQRMMKKMKNGGMAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaagcgatcgattgtcgcgcacactgcgcaatatcagcggccgcggg
cggctgaccgaagaaaatatcaaagagacattgcgtgaagtccgcatggcgttgctggaa
gcagacgttgcgctgccggtcgtccgcgacttcattaaccgggtgaaagagagcgccgtt
ggcgttgaggtcaataagagccttacaccgggtcaggaattcgtcaaaattgtccagaaa
gaactggaaaacgcgatgggcgaggcgaacaccgagctcaatttagcggcacagccaccg
gccgtcgtgctgatggcgggtttacaaggtgcgggtaaaaccaccagcgtcggtaaactg
gcgaaattcctgaaagaaaagaaaaagaaaaaagtgctggtggtgtctgccgacgtttat
cgccctgcggcgatcaaacagctggaaacgctggcacagcaagttgaagtggattttttc
ccgtcggatgcacaggaaaagccggttgatatcgttcgccgcgcccttcagcaagccaaa
ctgaaattttatgacgttctgatcgtcgataccgccggccgtttacacgtcgacgaagcg
atgatggacgagatcaaacaggttcacgccgcgattaatccggttgaaacgctgtttgtt
gtcgatgccatgaccggtcaggatgccgcaaataccgcgaaagcctttaacgaagcgttg
ccgctgacgggtgtgatcctgacgaaagtcgacggtgacgcccgcggtggtgctgcgctg
tcgattcgccatatcacgggcaaaccgatcaaattcctcggtatgggtgaaaaaaccgat
gctctggagccgttccacccggatcgtatcgcttcgcgtattttgggcatgggtgacgtt
ctctcacttatcgaagatattgagagtaaagtcgaccgcgcgcaggctgagaaattggcc
agcaagctcaaaaaaggcgacggcttcgacctgaccgacttcctcgatcagctcaagcaa
atgcgcaacatgggcggtatggcgaacatgatgagcaaattgccgggcgtcgggcagttg
ccggacaacgtcaaatctcagatggacgataaagtgctggtgcgtatggaagcgatcatc
aattcgatgacgatgaaagagcgcgctaagccagaaattattaaagggtcccgtaagcgt
cgtattgcgatgggttccggcatgcaggtgcaggacgttaaccgcttactcaagcagttt
gacgatatgcagcgcatgatgaagaaaatgaagaatggcggtatggcgaaaatgatgcgt
ggcatgaaaggtatgatgccaccgggtttcccaggccgctaa
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