Rivularia sp. PCC 7116: Riv7116_0772
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Entry
Riv7116_0772 CDS
T02364
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Riv7116_0772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_0772
Enzymes [BR:
riv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Riv7116_0772
DNA repair and recombination proteins [BR:
riv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Riv7116_0772
Prokaryotic type
Riv7116_0772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFY53359
LinkDB
All DBs
Position
985824..986528
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AA seq
234 aa
AA seq
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MIESQLPNSWKIALAEEFDKPYFKELQKFIEEERKSKVIYPPQEDVFATFELTPLEKVNV
LILGQDPYHGENQAHGLCFSVKPGVKIPPSLVNIYKELKDDVGFDIPNHGYLVAWAKQGI
LMINAVLTVEAHTPNSHKNKGWETFTDAVICKVNQKEEPVIFVLWGGYAKKKLKLIDTNR
HTVIQSAHPSPLSARNGFFGSKPFSKINSALRQAGKPEINFQLPLISQQRAVSS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatctcaacttcctaattcttggaaaatagcccttgctgaagaatttgataaa
ccttactttaaagaactgcaaaaatttatcgaagaagaaagaaaatctaaagtcatttat
cctccacaagaagatgtatttgcaacatttgaacttacacctttagaaaaagtaaatgtt
ttaatactcggacaagacccctatcatggtgagaatcaagcacatggattatgcttttcg
gtaaaacctggtgtcaaaattccaccttccttagttaatatttataaggaactcaaagat
gatgtcgggtttgatatccccaatcacggatatctcgtagcttgggcaaagcaaggtatt
ttgatgattaatgctgtattaactgtagaagcacatacaccaaattcccataaaaataaa
ggctgggaaactttcaccgatgcagttatttgtaaagttaatcaaaaagaagaacctgta
atttttgtgctttggggtggttatgccaaaaagaagctgaaattaatcgatacgaatcgt
cacacagttattcaatcagcacatccctctccactatctgctcgtaacggcttttttggt
agcaaacctttttcaaaaatcaattctgcactgcgtcaggcaggtaaaccagaaatcaat
tttcagttaccattaattagtcagcagcgagcagttagcagttaa
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