Roseburia intestinalis XB6B4: RO1_05520
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Entry
RO1_05520 CDS
T02597
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
rix
Roseburia intestinalis XB6B4
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
ABC_sub_bind
Herpes_teg_N
GCV_T
PuR_N
Motif
Other DBs
NCBI-ProteinID:
CBL11301
UniProt:
D4KVB1
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Position
539458..541164
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AA seq
568 aa
AA seq
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MKVMLHKNRGTHMKNHKVEKGCILAVILFVLLCIGGSFPVNAKETGRGRVLFISSYSYAW
ETIPQQIEGIKKSLGDDVTIDYKFMDTKNVDTAENVHLFYKSLSYYLSQVPAYDVIIVGD
DAAYNFVLVYRKIFGNTPIVFEGVNNVSKALAMDYNPNVTGIIENQTYGNTIALAKKIYP
EAAHIVAIVDNTVTGLSARKEFYSYKDEFPDLEFSDINASEFSQKDLIKSVESFDESTIL
LYILCSNDKDGNVYASAESVQMLSSRAHIPMFSGISIGMGKGLLGGEIVSHEEMGEIAGE
MALKILNGEPCENMDVITDSPMTYCFDETVMKRFGISRSMLPDDAKIINHEETFMEQYGK
VIRITSVIGGIMVLFIIWLVRDNMHKRKVNDTISSLNKKLNFMARYDALTALLNRRVFME
DLQYRIREKEPFGLIMFDMDNFKRVNDVYGHNEGDAVLKEMAARAGALVDDIFEVYRLAG
DEFVAIVQSGQAEVIDSYAMKILDTFKIPYQIAGGEQYLASSIGIAVYPKDGKNSTEVIA
AADHAMYKVKKNGKNSRAFYDADMEEQS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatgctgcataaaaatcgggggacacatatgaaaaatcataaagtagaaaaa
ggctgcattttagcagtaattctttttgtgctgctatgtataggggggagttttccggtc
aatgcaaaagaaacaggaagaggacgtgtgctgttcatcagttcctattcctatgcatgg
gagacgattccacagcagattgagggaatcaaaaagtcgttgggagatgatgtgaccata
gactataagtttatggataccaaaaatgttgatacggcggaaaatgtacatttattttac
aagagcctgagttattatttaagccaggtgccagcctatgacgtgatcatagtgggggat
gatgcggcgtataattttgtgcttgtatatcggaaaatttttgggaatacgccgattgtt
tttgaaggggtcaataatgtttcaaaagcgctggcgatggattacaatcccaatgtaaca
ggaatcatagaaaatcagacttatggaaataccatagcacttgccaaaaagatatatccg
gaagcagcacatattgttgcaattgttgacaatacggtaaccgggcttagtgcaagaaag
gaattttattcttacaaagatgaatttccggatctggagtttagtgatatcaatgcatca
gaattttcacagaaagatctgattaagagcgtagaatctttcgatgagagtacgattctt
ttatatattttatgcagtaatgataaggatggaaatgtttatgcatcggcagagtctgtc
cagatgctgagcagccgggcacatattcccatgttttccggtatatcgataggtatgggg
aaaggactgcttggaggtgagatcgtttcccatgaagagatgggcgagatcgccggggag
atggctcttaaaattttaaatggtgaaccatgtgagaatatggatgtcataactgattca
ccgatgacatattgctttgatgagacggttatgaagcgttttggaatttcgcgcagcatg
ttaccggatgatgcaaagatcatcaatcacgaagaaacttttatggagcagtatggaaaa
gtgatccgtatcacatctgtgatcggtgggatcatggttctgtttatcatctggctggtc
cgggataatatgcataaaagaaaagtgaacgacacgatcagttcactcaataaaaagtta
aattttatggcgcgctatgatgcgctgaccgcgcttttgaaccggcgcgtgtttatggaa
gatttacagtaccggatcagggagaaagaaccgtttgggctgatcatgttcgatatggat
aattttaagcgggtcaatgatgtctatggacacaacgaaggagatgcggtgcttaaggaa
atggctgcgcgtgccggagcactggtggatgacatattcgaggtttaccggctggcgggg
gatgaatttgttgcaatcgtgcaaagcggtcaggcagaagtgatagattcctatgcaatg
aagattttagatacatttaaaataccatatcagattgccggtggggagcagtatctggca
tcgagtatcggcattgcggtgtatccgaaagatggaaagaacagtacagaagtgatcgct
gcggcggatcatgcaatgtataaagtaaagaaaaacggaaagaacagccgggcattttac
gatgccgatatggaagaacagtcgtga
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