Rhinichthys klamathensis goyatoka (western speckled dace): 130068969
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Entry
130068969 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
rkg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130068969
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130068969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130068969
03110 Chaperones and folding catalysts [BR:
rkg03110
]
130068969
04121 Ubiquitin system [BR:
rkg04121
]
130068969
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130068969
Chaperones and folding catalysts [BR:
rkg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
130068969
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130068969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
IR1-M
TPR_19
TPR_14
TPR_16
TPR_7
TPR_2
TPR_1
TPR_12
TPR_CcmH_CycH
ARM_TT21_5th
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
130068969
NCBI-ProteinID:
XP_056088601
LinkDB
All DBs
Position
Unknown
AA seq
2217 aa
AA seq
DB search
MRRNKADVERYISAFQSSSPSQKENSVKGFLFAKLYFEAKEYELAKRHVSEYLTVQPKDP
KAHRFLGQLFERDGETDKAVGYYKRSVDLNPAQSDLVLKLAELLCGKPEPDNRAEFWVEK
AAKLLPGHPNVFNLREKLLSTRGQNGSIQLYELFQSECKLRPDDSDINGRLVRLYSADGR
HDEAVKHCLEVEKTGLLKDRLEWYELLVSTLQEYLCQPSVASNEQASRKFHKELLLALCS
RVRLTLKEKSCEESADALWSLDRAMQSLKNTAMNTLDELSEVFTETRAQLYLYAGTLLLK
TAQDGAQQWRVVRDLAAVCYLVAYQAPRPKVKSLKGEQASHEPLELLASDRQSQAGHMLL
NLSRDVEQLLKEVVEAFRNPNGPRLLFDMLFGSQEHDQLSFICNDEMHMVSTHAPSTDDL
AKWDSGAVLLHAGDLQHLAWLGLQWALMEQSVSLQRWLKQLFPRLTLETSKLDTNSPESI
CLLDLEVFLCGVVFSSQTQLQETARMASCSSPHQPRCLPLHIIRLLSSAKQREWWDAVYR
LIHKRALPGTLAKLRMLVQHGLGTLRAGEKHGLQPALLIHWAQHLTDVAERVKDYAGRGV
HYWKVVLPLLEKIRNKRIIPEPLEPMFMHFHSKDIQPSQVRVYEEEAAISSATLLDIEGN
TDEAIAKLEKLNSTSSNWHLAKIYQRLSEEAGNGMEETQGRCTNFLLQFRKYLTKIYQAS
PEDMDKLPVSMENVMDMLNKVNQQLAEDDERDEDHVDYPLTSSPGQPTEPHVKFSTPSPS
KSATSSSKRSMFSPKTTPLWAEDQKSLLQMLCQQVESLKNEVHDLRLNFPEATASSYRMP
RDNYPAEGRQEGFPGAQAFYGAPPTVATTGPSAYYNQSPAYNSQYLLRTAANVTPTKGPV
YGMNRLPPQQHMYAYQQSTHTPPLQSTPACIYPQEQVFGAPIRFESPATSLLSPYSEEYY
GHNFPQPTVNPTLPEPGYFTKPCVDTSTQPSKSSENKAVDPKMSLGSQFTGEPPKVPNFG
GVAGAPSTSATTAFKFNSNFKSNYGDFTFSLAQMKNSESLLGLLTSDIPPKAEGPSEPKH
QTQEHPPSQSGVFTFGSKSATGFSFTDAAQSKINIFGNTDQRFSFASGTKPVLGNPEARE
EKSGESDNDSTHVEEEEDGPHFEPIVPLPDKVDVKTGEEEEDEMFCKRAKLFRFDPETKE
WKERGIGSFKILKHRTSGKVRLLMRREQVLKICANHYITADMVLKPNAGSDKSWVWYAMD
YADEMPKTEQLAIRFKTADEATLFKFKFEEAQKLILESPQGQQMENKYETPKPQVSSKEM
DLKTLFSKKTGECDCDVCCVRNAPTSAVCVACNSAAPSTAKNKPVVSPHGQQLKKKCETP
KPQVSSKEMDLKTLFSKKQGEWDCDVCCVRNAPTSAVCVACNSAAPSTAKNKPVEELKGS
APVAPPAQLFSFGLTGDTDVSSKGLAFGSQIPVSFQFGSNDSAVTSVDLAAQADEKTIRA
DAPQHAKVSATPVFPGFGSQFVKKEGQWDCDSCLVRNDASATDCVSCKAPCKKNGHWDCE
TCLVRNEGTARQCVSCQAANPYMKGKTSTSPSSSSSSFSFGSSSKQPAATGFTATLNPGP
AFQFGTSKEKASSEGFKFVESSTSQADKSSSSNFSFSMPVPAGGFKFGIAESEANASDGQ
SQNGSASDLLKNIAELHREKEKEAIPSSSNELVDTGSHDNNPLLTGKPNSFGFEELANSS
QGSFQFGQKDIAELHREKEKEAIPSSSDEPSDTGSHDNNPLLTGKPNSFGFAELANSSQG
SFQFGQKDIAELHREKEIEAIPSSSDELVDTGSHDNNPLLTGKPNSFGFAELANSSQGSF
QFGQKDIAELHREKEKEAIPSSSDEPSDTGSHDNNPLLTGKPNSFGFAELANSSQGSFQF
GQKDIAELHREKEKEAIPSSSDEPSDTGSHDNNPLLTGKPNSFGFAELANSSQGSFQFGQ
KDIAELHREKEKEAIPSSSDEPSDTGSHDNNPLLTGKPNSFGFAELANSSQGSFQFGQED
PTFKGFAGAGQQLFTAINSTSKTDTSADQEDEMCKTKDNDDIQFEPVVQMPEKVDLVTGE
EDEKNFYSQNTRAQELAEESKQTFEESHRLLLDIPLQTPHKLVNTGRTAQLIQKDSEVTL
VWEKQPTADEEQRARRLKLPPTFLCGVSSDSDSERPGDFSAELHTLQHAQVRGLSPH
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaataaagcggacgtggagagatatatttctgcatttcaaagctcctctccc
tctcagaaagagaattcagtgaaagggtttctgtttgccaaactttactttgaggctaaa
gaatatgagcttgctaaaaggcatgtttcggagtatttgactgttcagccgaaggatcct
aaagcgcaccggttcctcgggcagctgttcgagcgggacggggaaacggacaaagctgtg
ggatattataagcgttcagtggatctgaatccggctcagtcagacctggttctgaagctg
gcggagctgctgtgcgggaaaccggagcctgacaaccgggccgagttctgggtggagaaa
gctgccaagctgctgccaggacatcccaacgtcttcaacctgagggagaagcttctgagc
acacgaggacagaacggctccatccagctgtacgagctgtttcagtctgagtgcaagctg
cggcccgacgactccgacatcaatggccggctggtgcgtctgtacagcgcagacggccgg
cacgacgaggcggtgaagcactgtctggaggtggagaagacaggccttctgaaggaccgt
ctggagtggtacgagcttctggtcagcacccttcaggagtatctctgccagccgagcgtg
gcgtcgaacgagcaggcgtcgcgcaagtttcacaaggagctgctgctggcgctctgcagc
cgcgtccgactgacgctgaaggagaagagctgcgaggagagtgctgatgctctctggagc
ttggaccgtgcgatgcagtctctgaagaacacggccatgaatactctggacgagctgtcg
gaggtgttcacggagacgagggctcagctgtacctgtacgccgggacgctgctgctgaag
acggcgcaggacggggcgcagcagtggagggtcgtgcgggatttagcggctgtctgttac
ctcgtggcctatcaggctccgagacccaaagtcaagagtttgaaaggtgagcaggcgtcc
catgagcctttggagctgctggcctcggaccgccagagtcaggcgggtcacatgctgttg
aatctgagccgggacgtggagcagctgctgaaggaggtggtggaggcgttcaggaacccg
aacgggccgagacttctgttcgacatgcttttcggctcacaggagcacgaccagctctcc
ttcatctgcaacgacgagatgcacatggtcagcacacacgcgcccagcaccgacgatctg
gccaagtgggacagcggtgcggtgctgctgcacgcgggcgatcttcagcacctggcgtgg
ctcggcctgcagtgggcgctgatggagcagagtgtcagcctgcagcgctggctcaagcag
ctcttccctcgcctcacgctcgagacctccaaactagacaccaactcacccgagtccatc
tgcctgctcgacctggaggtgttcttgtgtggcgttgtgttcagcagtcagacgcagctg
caggagacggcacggatggcctcgtgctcctcaccgcatcagccccggtgtttgcctctg
cacatcatcaggctcctgtcctccgccaagcagcgcgagtggtgggacgccgtctaccgc
ctgatccacaagagagcgctgcctgggacgctggctaaactgcggatgctggttcagcac
ggtctcggcacgctgcgcgccggagagaaacacggccttcagccggcgctgctcatccac
tgggctcagcatctcactgatgtggcggaacgggtgaaggactatgcaggccgcggtgtg
cactactggaaagttgtgcttcccttgcttgagaaaatccgaaacaaacgcattattcct
gaacctctggagccgatgttcatgcactttcacagtaaagacatacagccttctcaagtg
cgagtatatgaggaagaggccgccataagctctgccacactgcttgacatcgagggcaac
accgacgaggccatcgcaaagctggagaagctcaacagcacctcgtctaactggcatctt
gctaagatctatcagaggctgtcggaggaggcgggaaacgggatggaggagacgcagggc
aggtgcaccaacttcctcctgcagttcaggaaatacctgacaaagatttatcaggccagt
ccagaagacatggacaagttgcctgtgtctatggagaatgtgatggatatgctgaacaag
gtcaaccagcagcttgcagaagatgacgagcgggatgaagatcatgtggactatccgctg
acgtccagccccggtcagcccactgagccacatgtgaagttctccactccgtctccatcc
aaaagtgccacgtcttcatctaaaagatccatgttctcgcccaaaacgactcctctctgg
gcagaggaccaaaagtccctcctgcagatgctgtgccagcaggtcgagtccttgaagaat
gaggttcatgacctgcgccttaatttccctgaagcgacagcatcctcatataggatgccc
agagataattatcctgcagaaggacgtcaggaaggatttcctggagcgcaggcgttctat
ggtgctcctcctactgttgccactacaggtccctctgcgtactacaaccagtctccagca
tataattcacagtatcttctacgcactgctgcaaatgttacaccaacaaagggcccagtt
tacgggatgaatcgtcttcctccacagcagcatatgtatgcctaccaacaatcaacacac
acaccacctcttcagtcaactcctgcatgcatatatcctcaagagcaggtctttggtgct
cccatccggtttgagtcaccagctacatccttactctccccatacagtgaagagtattat
ggtcacaattttcctcaacctacagtcaatccaacattaccagagcctggatatttcact
aagccatgtgtcgatacatccacgcagccatccaagagcagtgaaaacaaggctgttgac
cccaagatgagtcttgggtcgcagttcacaggtgaacctcctaaggttccaaactttggg
ggggttgccggtgccccatcaacatcggcaacaactgcattcaagttcaactccaatttc
aagtccaattatggtgattttaccttttccttagctcagatgaaaaatagtgaaagcctc
ttgggacttctgacgtcagatattcctcccaaagcggaaggaccatcagaaccgaaacat
cagacccaagagcatccgcctagccaaagtggagtctttacttttggaagtaaaagtgcc
acagggttttcattcaccgatgctgctcagagcaaaattaatatttttggcaacactgac
caaagatttagctttgcaagtggaaccaaacctgtattaggaaatccagaggctcgggaa
gagaaaagcggggaaagtgataatgatagcacccatgtggaagaggaagaggatggacct
cattttgagcccattgtgcctcttcctgataaggttgatgtgaaaacgggtgaggaggag
gaagatgagatgttctgcaagagggcaaaactcttccggttcgaccctgagactaaagaa
tggaaagagaggggcattggaagtttcaaaattctaaaacacagaacatccgggaaagtt
cgtctgttgatgaggagggaacaggttctcaaaatctgtgctaatcactatatcactgca
gatatggtcctcaaaccaaatgctggatctgacaagtcctgggtgtggtatgctatggac
tatgcagatgaaatgcccaagactgagcagttggccattcgttttaaaacggcggatgag
gccacactgtttaaattcaaatttgaggaggctcaaaaattaattctagagtccccacaa
ggccaacaaatggaaaataaatatgaaactccgaagcctcaggtttcatccaaagaaatg
gatcttaaaacactgttttccaagaagacgggtgaatgtgactgcgatgtgtgctgtgta
agaaatgctcccacatctgcagtgtgtgttgcctgcaacagtgcagctccttctacagcg
aagaacaaacctgtagtgtccccacatggtcaacagttgaaaaagaaatgtgaaactcca
aagcctcaggtttcatccaaagaaatggatcttaaaacactgttttcgaagaagcagggt
gaatgggactgtgatgtgtgctgtgtaagaaacgctcccacatctgcagtgtgtgttgcc
tgcaacagtgcagctccttctacagcaaagaacaaacctgtagaggaacttaaaggctct
gcgcctgtggctcctcctgcgcaattgttttcttttggacttactggagacactgatgtc
agctcaaagggtttagcatttggatctcaaataccagtttcttttcaatttggatcaaat
gattctgcagtaacctctgttgaccttgcagctcaggctgatgagaaaactattcgggct
gatgcaccacaacatgcaaaagtgtcagcaactccagttttccctggttttggctctcaa
tttgttaagaaagaaggtcaatgggactgtgactcctgcttagtgaggaatgatgcttca
gcaactgattgcgtttcttgcaaagccccctgcaaaaaaaatggacattgggattgtgag
acttgcctggtaagaaatgaaggtacagctaggcagtgtgtttcatgtcaggcagcaaac
ccatatatgaaaggcaagacctctacttcaccatcaagttcctcttcttcattcagtttt
ggtagttctagcaagcaacctgctgcaacaggatttactgccactttaaatccaggtcct
gcttttcagtttggtacaagtaaggaaaaagcatcctcagaaggttttaagtttgtagag
tcctctacatctcaggctgataagtcaagcagttcaaatttttcgttttccatgccagtg
cccgctggtggtttcaagtttgggattgcagaatctgaggcaaacgcatcagacggacag
tcacaaaatggatctgcatctgacctcctaaaaaatattgctgaacttcacagagagaag
gaaaaagaagcaatcccaagttcctcaaatgagctcgtagacactggtagccacgataat
aatcccctccttaccggtaagcctaattcctttggtttcgaagaattggcaaattcttca
cagggtagttttcagttcggccagaaggatattgctgaacttcacagagagaaggaaaaa
gaggcaatcccaagttcctcagatgagccctcagatactggtagtcacgataataatccc
ctccttaccggtaagcctaattcctttggtttcgcagaattggcaaattcttcacagggt
agttttcagttcggccagaaggatattgctgaacttcacagagagaaggaaatagaagca
atcccaagttcctcagatgagctcgtagacactggtagccacgataataatcccctcctt
accggtaagcctaattcctttggtttcgcagaattggcaaattcttcacagggtagtttt
cagttcggccagaaggatattgctgaacttcacagagagaaggaaaaagaggcaatccca
agttcctcagatgagccctcagatactggtagtcacgataataatcccctccttaccggt
aagcctaattcctttggtttcgcagaattggctaattcttcacagggtagttttcagttc
ggccagaaggatattgctgaacttcacagagagaaggaaaaagaggcaatcccaagttcc
tcagatgagccctcagatactggtagtcacgataataatcccctccttaccggtaagcct
aattcctttggtttcgcagaattggcaaattcttcacagggtagttttcagttcggccag
aaggatattgctgaacttcacagagagaaggaaaaagaggcaatcccaagttcctcagat
gagccctcagatactggtagccacgataataatcccctccttaccggtaaacctaattcc
tttggtttcgcagaattggcaaattcttcacagggtagttttcagtttggccaggaggat
cccactttcaaaggctttgcaggggctggccagcagctgtttacagccattaattccacc
tccaagacagacacctctgctgatcaagaagatgaaatgtgcaaaacaaaggataatgac
gatattcagtttgagccagttgttcagatgcctgaaaaggttgaccttgtgacaggggaa
gaagatgagaaaaacttctattcacagaatacaagagcacaagagcttgcagaagagtcc
aagcaaacatttgaggagagtcaccggctgctattggatattcctttacagacccctcac
aagcttgtgaatactggcaggacggcccaacttatacagaaagactctgaggtcacacta
gtgtgggagaagcagccgactgcagacgaggagcagagagccagacgcctgaagctgccg
cccaccttcctctgcggtgtcagcagcgactccgactccgagcgacccggcgacttcagc
gcagagctacacacactgcagcacgctcaggtcagaggactttctccacactga
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integrated database retrieval system
