Rhinichthys klamathensis goyatoka (western speckled dace): 130070628
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Entry
130070628 CDS
T09701
Symbol
slc8a1b
Name
(RefSeq) sodium/calcium exchanger 1b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04260
Cardiac muscle contraction
rkg04261
Adrenergic signaling in cardiomyocytes
rkg04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130070628 (slc8a1b)
04020 Calcium signaling pathway
130070628 (slc8a1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130070628 (slc8a1b)
04261 Adrenergic signaling in cardiomyocytes
130070628 (slc8a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130070628 (slc8a1b)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130070628 (slc8a1b)
Transporters [BR:
rkg02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
130070628 (slc8a1b)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Others
130070628 (slc8a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
130070628
NCBI-ProteinID:
XP_056091066
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MRLRETSPRLFPSFQCLVVLVILLFNVHHVTAEHAPDQSQDHSSPANKSLSCGGTVTCAA
GVILPVWEPPNPSFGDKVARATVYFVALVYMFLGVSIVADRFMASIEVITSQEKEITIKK
PNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFEAGDLGPSTIVGSAAF
NMFVIIGICVYVVPDGELRKVKHLRVFFVTATWSIFAYLWLYLILAVISPGIVQVWEGLL
TLFFFPICVVFAWIADRRLLFYKYVYKRYRAGKHRGMIIETEGDRPLPSKVDIEMDGKML
NSHAVDFLDGTLALELEDKDLDEEEARREMAKILKELKQKHPDKEVEQLIELANYQVLSQ
QQKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSMQEVRSDTGENDPISKIFFDPASY
QCLENCGTVAVNVIRRGGDLNQTVSVEFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIR
VGIIDDDIFEEDENFLIHISNVRVLHEGDEPETTEANHVDTIATLGVPSTASVTIFDDDH
AGIFTFEEPVSHVSESVGIMEVKVLRTSGARGVVSLPYKTVEGTARGGGEDFEDSHGVLE
FQNDEILKTITVRVLNREEYDKQCSFCVELQTPLWRRRGWTVYREEEKEAGKEEEEPLTG
EDDEERRIAEMGKPMLGDHPKLEVIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQFIE
AITVSAGEDDDDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSILM
IGLLTAFIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNV
TGSNAVNVFLGIGVAWSIAAIYHNSKGRDFKVEPGSLAFSVTLFTIFAFICVAVLMYRRR
PDIGGELGGPRTAKVLTTMLFVSLWLLYILFSSLEAYCHIKGF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcgtgagacctccccacgcctcttcccgagctttcagtgtctagtcgtcttg
gtgatactgctctttaacgtccaccatgtgacagcggaacatgctccggaccagagccag
gatcatagttctcctgccaacaagtctttgtcctgtggtgggactgtcacatgtgcagct
ggagtcatccttccagtgtgggaacctccaaacccttcctttggggacaaggtagcccgg
gccacggtttactttgtggcactggtatacatgtttctgggagtttcgattgttgctgac
cgcttcatggcatccattgaggtaatcacctctcaggagaaggagatcaccattaagaaa
ccgaatggtgaaacgaccaccacaactgtacgcatctggaacgaaactgtgtccaacctc
accctcatggctctggggtcgtctgctcctgagattctgctctcggtcattgaagtgtgc
ggccataactttgaagctggtgacctcggaccctccaccatcgtcggcagtgcagctttc
aacatgttcgtcattattggaatctgtgtctacgtggtgcccgacggagagcttcgcaaa
gtgaaacacctgcgagttttcttcgtcaccgccacttggagcatcttcgcctacttgtgg
ctatacctgatcttggctgttatctcgccgggcattgtccaggtgtgggagggtctcctc
actcttttcttctttccgatttgtgtggtcttcgcttggatcgctgaccgccggctcctg
ttttacaagtatgtttacaagcgctaccgagccggcaagcaccgtggcatgatcatagag
acggagggggaccgtcctctgccatccaaggtggatatcgagatggacgggaagatgctg
aactctcacgcagtggacttcttggatggaactctggctttggaactggaggacaaagac
ctagatgaggaggaagctaggcgtgaaatggcaaagatcctgaaggaactgaagcagaaa
catcccgataaagaagtggagcagttgattgaacttgctaattaccaggtgctcagccag
cagcagaagagccgtgcgttctaccgatgccaggcgacccgcttgatgactggagcaggt
aacattctaaagaagcatgcagcggaccaggctcgtaaagcagtgagcatgcaagaggtg
cgcagtgacactggagagaatgaccccatttctaagatcttttttgaccctgcctcttac
cagtgcctggaaaactgcggaactgtggcggtgaatgtaattcggcgtggaggcgatctc
aaccagaccgtgtcggtggaattccgtacagaagatggaaccgcgaatgccggctcagac
tacgaattcactgaaggcactgtcgttttcaagccaggtgagacgcagaaggagatccga
gttggaattattgacgatgacatctttgaagaggacgagaacttccttatccacatcagc
aatgtccgtgtgcttcatgagggtgatgagccagagaccactgaggccaatcacgtggac
accatcgcaacactcggtgtgccctccacagcaagtgtcaccatctttgacgatgaccat
gctggaatcttcacattcgaagagccagtctcccacgttagtgagagtgtgggtatcatg
gaagtgaaggtcctgcgcacgtctggcgcccgtggggtggtgtcactgccgtataaaacc
gttgagggaactgcccgtggaggaggagaggactttgaagactcccatggtgttctggag
ttccaaaacgacgaaatcttgaagacgataacagtcagggttctcaatcgagaggaatac
gataagcaatgcagcttttgcgtagagctacagacgccactttggagaaggagaggatgg
acagtatacagagaggaggagaaagaggcggggaaggaagaggaggagcctctgacaggc
gaagatgatgaggagcgacgcatcgctgaaatggggaagccaatgctcggagatcacccc
aaactggaggttatcatcgaggaatcttatgaattcaagaacactgttgataagctgatt
aaaaagacaaacttggctcttctggttggcaccaacagctggagggaccagtttattgag
gccatcacagtcagcgctggtgaggatgatgatgatgaagaatgtggagaggagaagctc
ccctcctgcttcgattacgtcatgcatttcctcaccgtcttctggaaagttctcttcgcc
ttcgtcccgcccaccgactactggaacgggtgggcatgtttcgtggtgtcaatcctcatg
atcggcctcctgacggctttcatcggagatctagcatcccacttcggctgcaccgtcgga
ctcaaagactccgtcacagccgtggtgtttgtggcgctgggcacttcagtgccagacacc
tttgccagtaaagtagcagcgacacaggatcagtacgccgacgcctccatcggaaacgtg
accggcagcaatgctgtgaacgtcttcttgggcatcggagtggcctggtccatcgccgcc
atctaccacaactcaaagggccgcgatttcaaggtggagccgggtagcctggccttctcc
gtcaccctcttcaccattttcgccttcatctgcgtggcggtgctcatgtaccgccgccgg
cccgacatcggcggtgagctggggggtccgcggactgctaaagtgctgaccaccatgctt
ttcgtcagcctctggctcctctacatcctgttctcctctctggaggcttactgccacatc
aagggcttctaa
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