Rhinichthys klamathensis goyatoka (western speckled dace): 130071739
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Entry
130071739 CDS
T09701
Symbol
toporsb
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130071739 (toporsb)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130071739 (toporsb)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130071739 (toporsb)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130071739 (toporsb)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130071739 (toporsb)
UBL E3 ligases
130071739 (toporsb)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130071739 (toporsb)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130071739 (toporsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130071739
NCBI-ProteinID:
XP_056092573
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MMAPTKMKLRVRKKDSVGKSSQRLLANASPDSKCPICLDGFNNVASLDRCLHQFCFRCIH
EWSKNKAECPLCKQPFHSIYHSVKGEKDFKEFVVPPVENGVAANATASNAPQRVLRPRAL
RGRERRSHRAPVPSSSPPIEDVMFGGLTDAAALTDNQDVQQMVLRLTARRQGRGEGRSLR
RLRDQDVVSFRRALYRTGVRVRNTRDVGRQRDISASFLRQNPGCLRRLLPWLQRELTVLY
GSHGSLVNIVQNIIISRIMNYNMEDSAIRDELRPFLLARTDHFLHELVSFARSTLNMETY
DQQAIYDCPAPSYEEGSSSDLSVIAISEDDDDNDSEDNVTENPSAVQEHRASVANASGTE
SLLSQSAWDDETPGPSYSTLFPSSSQSQDEGAEPSSSTAPPFSGPDMTGPAASSSVSAGR
GEDNEEEECLIVGYVKPMAERTPELVQLSSDSSEEEQEAADTETTTTVTKSETSQMELPS
QSHMNLRIPSLSPGLAPSCSPQRTHSDLLSRERETDYLSCRAHPSNDGSDLRQNRDDTEL
KAHGRRKDSHRRSVSKEKAKSLDQSWHDKTPDCLPTQTRSPPSWSGQSPTVSIWSSSPVS
GSNASDCSTSLNNTSLEHSCHVRDKLSQSPSYSRKRRIREMKSRSPDLDSFLNFHHPRES
QRCRKRRKRAISSSSADSQSERSCLDKPSGKRKYKTRHLERAAQRLHEEGTATKEKRRRR
SRERSPSVEIIYERRAPEPHWHQRKKRRHRKRKRELRSPTVITIDSDSDRTIDCLDRVMD
IIDQTAADVEPRDGTRGQDMIQNLSCTLASSNPQSESSSPVVRTDPTTERTLNLDDYVVD
VVDRSSSDCSRNVDDSSPEEFVPNPFPMGSMSPAPPSDTRLLETILQDLEEFLPEATPSP
YASSHVQQERASIPRKDQSDTRGVAKNLEKNNTDGDGPQEPVTNIAS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcccactaagatgaagttgcgtgtgaggaagaaagacagcgttggcaaatct
tctcagcgtttattggctaacgcgtcaccagactccaaatgccccatctgcctcgacggc
ttcaataacgtggcgtcgctggaccgctgcctgcaccagttctgcttccgctgcatccac
gagtggtccaaaaacaaagcggagtgtccgctgtgcaagcagccgttccactccatatac
cactcggtcaaaggggaaaaagattttaaggagtttgtggtgccgccggtggagaatgga
gtggcggcgaacgccaccgctagcaacgccccccagcgcgtgctacgcccccgagccctt
cgaggcagagagaggcggagccacagagcgcccgtcccttcgtcttcaccaccaattgag
gacgtcatgttcggcggtctcacggacgcggcggcgctaacggataaccaagatgtgcag
caaatggtgctacgactgacggcgcgcaggcaagggcggggcgaggggcggagcctgcga
cgcttacgggaccaggatgttgtctcgttccggcgtgcgctttacaggactggcgtacgt
gtgcgtaacacgagagacgttggtcggcagagggatatttcagcgtcgttcttacgacaa
aaccctggatgtttgcgccgacttttgccttggctgcaacgcgagctcacggtgttgtac
ggttcgcacggatcgctggtgaacatcgtgcagaacatcatcatctcgcgcattatgaac
tataatatggaggactcggccattcgggacgagctccgccccttcctgttagcgcgcact
gaccacttcctgcacgagctggtgagtttcgctcgctccaccctcaacatggagacgtat
gaccagcaggccatttacgactgtcccgctcccagctacgaggagggcagcagctcggac
ctttccgttatcgccatctctgaggatgatgatgataatgacagtgaggacaatgtgaca
gagaatccctctgctgtccaggaacaccgtgcatccgttgccaatgcaagtggaacggaa
agtttgctgagtcagtcagcgtgggatgatgagacgcctggtccctcctattcaaccctc
tttccatcttctagccaatcacaggatgagggggcggagccaagctcaagcacagccccg
cctttcagcggccctgacatgactggccctgcggcaagtagcagcgtgtcagcaggacgg
ggtgaagataacgaagaggaagagtgcctgattgtgggatacgtgaagccgatggccgaa
cggaccccagagcttgttcagctctcctcggattcgtctgaagaggagcaggaggcagct
gatacggagacgacaaccacagtaacgaaatcagagacttcccaaatggagctcccttcg
cagtcccatatgaacctgcgtattcccagtttatccccaggcctcgctccctcatgcagt
ccccagcggacacactcggacttactcagcagagaaagagagaccgattacttgtcctgc
cgcgctcacccatccaacgatggttcagatttacggcagaatcgagatgacactgagctc
aaagcgcatgggagacgcaaagactcacatcgccgctcagtcagcaaagaaaaagccaag
agtttagaccaatcatggcatgacaagaccccagattgcttgccaacccaaacacgttcg
cctccaagttggtccggtcagagtccaactgtttctatttggagcagcagccctgtctct
gggtcaaacgctagcgactgctcgacctctctaaacaacacgagcctagagcattcgtgc
cacgtgcgagacaaactctcacagtctccttcctactccaggaagaggagaatcagggaa
atgaagagcaggtctcccgacttggactcgtttcttaatttccaccatcccagagagtca
cagcgctgtcgtaaacgccgcaagcgagcgatcagtagcagcagcgccgactcgcaatcc
gaaaggtcctgcctggacaaaccaagtgggaaacgcaagtacaaaacccggcacttggag
cgagcggcccagcggctgcatgaggagggaactgcaaccaaggaaaagcggcggcggcgc
agtagggaacgatctcccagtgtggagatcatctacgagcgaagggcgcccgaaccgcat
tggcaccagcggaagaagaggaggcaccgaaagcggaagagggaactccgttcacccact
gtaatcacgattgacagcgacagtgaccgtaccatcgactgtctggaccgtgtcatggat
attatagaccaaaccgctgcagatgttgagccgagggacgggactcgtgggcaagatatg
atccagaacttgagttgtaccttagcctcctcaaatcctcaatccgagtcctcgagtccc
gtagtccgcactgacccaaccactgaacgcacactaaacctggacgactatgtggtggac
gtagtcgaccgcagtagttccgactgctcccgaaatgtggatgacagtagccccgaagag
tttgtgcccaaccccttcccaatgggttcgatgtcaccagccccaccttcggacacaaga
ctgcttgaaactatactacaagatcttgaggaattcctaccagaggcgacgccgagtcct
tacgcaagttctcacgtccaacaggagcgagcttctatccctcgaaaagaccaatcagac
acaagaggagttgcaaaaaacttggagaaaaataacacggacggagacgggccgcaagag
ccggtgaccaacattgctagctag
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