Rhinichthys klamathensis goyatoka (western speckled dace): 130077942
Help
Entry
130077942 CDS
T09701
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130077942 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130077942 (crnkl1)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130077942 (crnkl1)
Spliceosome [BR:
rkg03041
]
Complex B
Other components
Prp19-related factors
130077942 (crnkl1)
Complex C
130077942 (crnkl1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130077942 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_CcmH_CycH
Mad3_BUB1_I
U3_assoc_6
SR-25
DUF755
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
130077942
NCBI-ProteinID:
XP_056099352
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDKEELND
YKLRKRKAFEDNIRKNRTVISNWIKYAQWEESLQEVQRARSIYERALDVDHRNITLWLKY
AEMEMKNRQVNHSRNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARSIYENFVMVHPEVKNWIKYANFEDKHGYIALGRKVFERA
VEFFGEDHISESLYVAFARFEEKQKEFERVRIIYKYALDRIPKQQAQELFKNYTVFEKRF
GDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADADTVREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLEVIPHKKFTFAKIWLLYGQF
EIRQKNLQNARRGLGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQFEMSIDSDDRIQRCRQIYEEANKSMQGCEEKEERLMLLESWRDYE
EEFGSMANKDRVQKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQDEEEEEEEEEEEQQQVPQGKEPQESSEPEEEEPAAHREQKEKENDDRDDDDE
SSSSSSSSSSSSSDSESDGHHEDDKEKTEQTKADAEKQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgcggcgggtaaacagagaatcccgaaagtggcgaaggtgaagaataaa
gcccctgcggaggtgcaaatcaccgcagagcagctgctcagagaggcgaaagagagagag
ctagagctgctgcctcctccacccaaacagaagatcacagacaaggaagagctcaacgac
tataaactgaggaagagaaaggcgtttgaagacaacatcaggaagaacagaactgtcatc
agcaactggatcaagtacgcacaatgggaggagagcctgcaagaggtccagagagctcgc
tccatctacgagcgtgcgctcgatgtggatcaccgcaatatcacactgtggctgaagtat
gcagagatggagatgaagaaccggcaggtgaatcactctcgcaacatttgggaccgagcc
atcaccatcctgccccgtgtgaatcagttctggtacaagtacacctatatggaggagatg
ctggggaacgttgccggctgcaggcaggtgtttgagcgctggatggagtgggagccggag
gaacaggcctggcattcttacatcaactttgagctgcgctataaggaggtggacaaggcc
cggagcatctatgagaatttcgtgatggtccatcctgaagtgaagaactggatcaagtac
gctaactttgaagataagcacggctacatcgctctcgggaggaaagtgtttgagagagcc
gtggagttttttggtgaggatcacatcagcgagagcctctacgtggcttttgccagattt
gaggagaagcagaaagagtttgagagagttcgcatcatctataaatacgctttggaccga
atccccaagcaacaggcccaggagctgtttaagaactacaccgtgtttgagaagaggttt
ggagacaggaggggaatcgaagacgtgatcgtcagcaaaaggaggtttcagtatgaagag
gaagtcaaggccagcccacataattatgatgcttggtttgattacctgcgcctggtggag
agtgatgccgatgcggacacagttagagaagtgtatgagagagcgatagccaacataccc
cccatccaagagaagagacactggagacgctacatctacctgtggattaactacgctctc
tatgaggagctggaggtcaaggaccctgagagaacgaggcaggtgtaccaggcatgtctg
gaggttatacctcacaaaaagtttacatttgccaagatttggctcttatatgggcagttt
gaaatccgacaaaagaacctccagaatgctagacgaggcctgggcacatccattggaaaa
tgtcccaaaaacaaactgtttaaaggctacattgagctggagctacagttgagggagttt
gaccgctgcaggaagctctacgagaagtacctggagttcagtccagagaactgcaccacc
tggatcaagttttctgagctggagacaatcctgggagacacagaacgggccagagctata
tttgaactggccattggacaaccacgattggacatgccagaggtgctgtggaagtcatac
atcgacttcgagatcgagcaagaagaatacgacaacacacgaggactgtacaagagactg
ttacagcggactcaacatgtcaaagtctggatcagttatgcgcagtttgagatgtcgatt
gacagcgacgaccgcattcagcgatgcagacaaatctacgaggaggccaataagagtatg
cagggctgtgaggagaaggaggaacgtctgatgctcctggagtcctggagagactatgag
gaggagtttggatcgatggccaacaaggacagagtccagaaactcctgccggagaaggtg
aagaagaggaggaagatcacagcggaggatgggtcggatgcaggttgggaagaatattac
gactacatcttcccagaggatgctgccaatcagcccaacctcaaactgctggccatggcc
aagatgtggaagaaacagcagcaggatgaggaagaggaggaggaggaagaagaagaagaa
caacagcaggttcctcaaggaaaggaaccacaggagagctcagaaccagaagaggaggaa
ccggcggcccacagagaacagaaggaaaaggaaaatgacgatcgtgatgatgatgacgag
agtagtagtagtagtagtagtagtagtagcagcagcagtgacagcgagagtgatgggcac
cacgaagacgacaaagagaagactgaacaaacaaaggcggacgcagagaaacagtga
DBGET
integrated database retrieval system
