KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130081932
Entry
130081932         CDS       T09701                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130081932 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rkg03041]
    130081932 (sf3a1)
Spliceosome [BR:rkg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130081932 (sf3a1)
 Complex B
    130081932 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    130081932 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 130081932
NCBI-ProteinID: XP_056102633
LinkDB
Position
Unknown
AA seq 792 aa
MPPGPVQIMQPELTLNNKEQKEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQASQQLPQKV
QAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLLKLKKEAENSREVLDQVRYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQE
RYEKFGESEEVEMEVESEDEEDERGGREDRHAAQLDQDTQLQDMDEGSDEEDDGMKAPLP
PDNPMPPPLPPTPDQVIIRKDYDPKASKSLLPMVSSDEYLISPITGEKIPASKMQEHMRI
GLLDPRWLEERDRNIRERRIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDDTKEKIGPSKPN
EMPQPPMSSAASSMPKPNPPINTMPRPPVSLNLFLHSRMAPQVRTTLLPAVPVIPRPPVS
PVVRLGPGQVLAPMPPMLHAPRINVVPMPPSGPHIMAPRPPPMVVPAGFVPAPPVPQPPS
SVSAPMPPAHPPPPHEDEPSSKKMKTEDNLIPEEEFLRRTKGPVAVKVQVPNMQDKTEWK
LSGQVLNFNLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSVI
HLALKERGGRKK
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtgcagatcatgcagccggagctaacgttaaataacaaggagcag
aaagaagagactccagccacaaagcccattgttggaatcatctatccgcctcctgaagtc
cggaacattgttgacaagactgccagcttcgtggccaggaatggacctgagttcgaggcc
aggattcgacagaatgaaatcaacaacccaaaattcaacttcctcaaccccaacgaccct
taccatgcttactaccgccacaaggtcaacgagttcaaggagggtaaagctcaggaaccg
tctgcggcggtgcctaaagtcatgcaacagcaagcatcacagcagcttcctcagaaggtt
caagcgcaggtgatccatgagacggtggtgcccaaggagcctccacctgagtttgagttc
attgccgaccctccctccatctcagcctttgacctggatgtggtgaagctgaccgcacag
ttcgtcgcccgaaatggccgtcagtttctcacgcagctgatgcagaaggagcagaggaac
taccagtttgacttcctgcgaccacagcacagcttgttcaactactttacaaaactggtg
gaacagtacacaaaggttttaatccctccaaaaggtcttttgctgaaactgaagaaggaa
gcagagaattctcgtgaggtcttggaccaggtcagatatcgcgtggagtgggccaaattc
caggaacgagagaggaagaaggaagaggaggagcgagagaaggagagggtggcttatgct
cagattgactggcatgactttgtggtcgtggagacggtggacttccaaccaaatgaacaa
ggtaatttccctcctcccactactcctgaggagctgggcgctcgtatcctgatccaggag
cgctatgagaaatttggagagagtgaagaggtggagatggaggtagagagtgaagatgaa
gaggatgagagagggggcagggaggacagacacgcagctcagctggaccaggacacacag
ctgcaggacatggacgagggctctgatgaagaggatgatggcatgaaagctcctctaccc
cctgataaccccatgccaccacctctgccccccaccccagaccaggttatcattcgcaaa
gactacgaccccaaggcctctaagtccctgctccccatggtctcctctgacgagtacctc
atctcccccatcacgggtgagaagatcccagccagtaagatgcaggagcacatgcgcatc
ggccttctggatccccgctggctggaggagcgtgaccgcaacatccgagagcgtcggatc
gaggaggaggtgtacgctcccggcctggacatcgagagcagcctgaagcagctggccgag
agacgtaccgatatctttggtgtggaagaaacggccatcggtaagaagatcggagaggag
gagatacagaagcctgaggagaaggtcacatgggacggtcactcaggcagtatggctcgt
acccagcaggcggctcaggctaacatcaccctgcaggagcagatcgaagccatccacaaa
gctaaaggtctggtgcaggaggacgacaccaaggagaagatcggcccgagcaagcccaat
gagatgcctcagccgcccatgtcatcagcagcctccagcatgcccaaacccaacccacca
atcaacaccatgcccagacctcctgtgagtctcaatctgtttctgcattcaagaatggca
ccccaagtacggaccactttgcttcctgctgtgccagtcatacccagacctccagtttcc
cctgtggtgcgcctgggccctggacaagttctggctcccatgccacccatgctccacgcc
ccacgcatcaatgtggtgcccatgccaccctcaggaccccatattatggcacccagacct
ccacctatggtggtccctgctggttttgtacccgctccccctgtgcctcaacctcccagc
tctgtttccgcccccatgcctcctgctcatcctccacctcctcacgaggacgagccttcc
agcaagaaaatgaagaccgaggacaacctgattccagaagaggagttcctgcgcaggacc
aagggacctgttgcagtcaaagtgcaagtgcccaacatgcaggacaagaccgaatggaag
ctgagtggccaagtgctaaacttcaacctgcctctcacagaccaggtatctgtcatcaag
gttaagatccatgaagccactggtatgccggctggaaagcagaagctgcagtatgagggt
attttcatcaaagattccaactctctggcatattacaacatgaacaatggctccgtcatc
catctggcccttaaggagagaggaggaaggaagaagtag

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