Rhinichthys klamathensis goyatoka (western speckled dace): 130083428
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Entry
130083428 CDS
T09701
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130083428 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130083428 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130083428 (cdh5)
04090 CD molecules [BR:
rkg04090
]
130083428 (cdh5)
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Major cadherins
130083428 (cdh5)
CD molecules [BR:
rkg04090
]
Proteins
130083428 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
DUF7318
Motif
Other DBs
NCBI-GeneID:
130083428
NCBI-ProteinID:
XP_056104430
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MMKLSAWGQMTEPVCWAGILVVLCTLSMGADVQQALKTPSMPSTVLQRHKRDWKWDKLYV
YEETPPKTPPEKIGKLENTLFSESTRYNLSGEGAYDIFSVNDNGDILVNAMLDREKKSTY
TLSASIINIKNRKMMDKDDTFVIVVLDINDNSPVFPPDLSGSISESSIAGSIVMTVNATD
ADDPTTQNGMIEYRLLNGTDLFNINNKGEIITLRSDLDREKQSQYLIAIQAKDMPSIRTG
NSATTIVTININDINDNIATFKKGKYHFNVKEDSEIGFKIGILEVEDKDETQNKDPTFTI
QHQYDDEMFEIKRSNEKDGILSLKVPLDYEKVKTYTFSVNVDEHTVSTKTDNQGPNLLKR
AEVSINVIDVDEPPVFSQTEYMFSIYEGPFKNPRIGAVSARDPDSTGFKIRYSIEDPNCP
VAVDPVQGHLSLKWQLDREQESSYTFQVTAQEDKPNGLKSYAMVKLKVLDINDNEPELTN
GSYVYVCESDKPGTIIGTIGAYDKDENSGRFRFTLAKKSSNFSLHDNQDNTSSIVLKQGG
FSTEHSVEHVLEIEIADGGTPEKRSINLLQIKVCKCQPGRRMEYCMAYAQTGMSVSALLA
ILLCIVTILVIVILIVLRRRYQNDVLVTKSSGEIHEQLVRYDEEGGGEMDTNGYDVSILT
SACHDSSFRPGVGPSLYAIVKKPPACKGDMAMMIEVKKDEADHDRDGIPYDTLHIYGYEG
SESLAGSLSSLDSSSSGSNLDYDFLNEWGPRFRTLAQLYGVDGSDTDSSY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaactgtctgcctgggggcagatgactgagcctgtatgctgggcaggtatcctg
gtcgttttatgtaccctcagcatgggagctgatgtccagcaagctctgaaaacaccctcc
atgccgagcacagtactccaaagacataagagagattggaaatgggataaactttatgtg
tatgaggaaacacctccaaaaaccccacctgaaaaaattggaaagctagagaatacactt
ttctctgagtccacaagatataatctctctggagaaggtgcttatgacattttttctgta
aatgacaatggggatatcttggtcaatgcaatgctggaccgggagaagaaaagtacctac
acactctcagcttcaataatcaacattaaaaacaggaagatgatggacaaagatgatacg
tttgttatagtggtcctggatattaatgacaatagccctgtttttccacctgacctctct
ggatctatcagcgagtcctctatagcaggatcgatagtaatgacagtaaatgcgactgat
gctgatgatcccaccactcaaaatggaatgattgagtacagactgctaaatgggacagac
ctcttcaacatcaacaataaaggtgaaatcattacattgagaagtgacctggaccgtgag
aaacagagtcagtacctaattgctatacaagccaaagatatgccaagtattaggactggg
aattctgctactaccattgtgaccatcaacattaatgacataaatgacaacattgccacc
ttcaagaaaggaaaataccattttaatgtgaaagaagacagcgaaatcggatttaaaatt
ggcatattagaggtggaggacaaagacgagacacaaaacaaagatcctacttttactata
caacatcaatatgatgatgaaatgtttgaaatcaaacgaagtaatgagaaagatggaatt
cttagcctcaaagtgcctcttgactatgaaaaagtaaagacgtacacttttagtgtaaac
gtggacgagcacacagtgtctacaaaaacagataaccaaggaccaaacctgctgaagaga
gccgaagtttccatcaatgtaattgatgttgacgaaccacctgttttcagccaaactgaa
tacatgttcagcatctacgagggccccttcaagaacccgcgcattggggctgtttcagca
agggatccagatagtaccggtttcaaaatacggtactctattgaagacccaaactgccct
gtagctgtggatcctgttcaaggacatctgtctttgaagtggcaactggacagggagcaa
gaatcctcatacacatttcaggttacagcacaagaggataaaccaaatggcctaaagtcc
tatgcaatggttaaactaaaggttcttgacattaacgacaatgaaccagaactaactaat
gggagctacgtgtatgtttgtgagagtgataaacctggaacaatcattgggactattggt
gcctacgacaaggatgaaaattcaggcaggttccgcttcaccctggcgaaaaagagctca
aacttttcccttcatgataaccaagacaacacttcgagcattgtgctgaagcaaggaggt
ttcagtacagagcactcagtggaacatgtgctcgaaatcgaaatcgctgatggaggtaca
ccagaaaagaggagcattaacctactccagattaaagtgtgcaaatgtcagccgggacga
cggatggagtactgtatggcctacgcccagaccggaatgagcgtcagcgccctcttagcc
attcttctctgcatcgtcaccatcctggtcatcgtcatcctcattgtgttgcggaggcgc
tatcagaatgacgttttggtcaccaagtcgtctggcgagatccacgagcagctggtgaga
tatgacgaagagggcggtggagagatggacacaaatggttatgacgtctccatcctgacc
tccgcctgtcacgacagcagctttcggcctggcgtggggccttcgctttatgctatagtg
aagaaacctcctgcttgtaagggtgacatggccatgatgatcgaggtgaagaaggatgag
gcggaccatgaccgtgatgggattccctacgatactttacacatctatggttatgaggga
tctgaatccctggccggttccctcagctctttggactcgtcctccagtggatccaatttg
gactacgacttcttaaatgagtggggacctcgtttcaggaccctggctcagctctatgga
gtagacggctctgataccgatagctcctactga
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integrated database retrieval system
