Rhinichthys klamathensis goyatoka (western speckled dace): 130086287
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Entry
130086287 CDS
T09701
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130086287 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130086287 (slc6a11b)
Transporters [BR:
rkg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130086287 (slc6a11b)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130086287
NCBI-ProteinID:
XP_056108535
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MTAEKTIPIINGKADETMDPEAPSPSAVRSNDKKVVNERGQWNNKIEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILSWAIFYLFNCFTSELPWASCGHYWNTENCVDFNNESIANF
TNPYSTSPVIEFWERRVLKISSGIEEVGSLRWELAFCLLLAWIICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLIRGITLPGAANGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWSPLWACLFFMMLIFLGLDSQFVCVESLVTAVIDMYPKTFRVGY
RRELLILGMSVVSFFLGLIMLTEGGMYVFQLFDAYAASGMCLLFVAIFESICIGWIYGAD
RFYSNIEDMIGYKPIFFIKWCWKYFTPGICAGIFLFFLIKYKPLMYNNVYTYPDWGYGIG
WMMAMSSMVCIPVGIIVQIWKTKGTFREVKAFFLF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagacgatccccataataaatggaaaagcagatgaaacgatggacccc
gaagcgccgagcccgagcgcggtgcgcagcaatgataagaaggtggtgaatgagagagga
cagtggaataataagattgagtttgtgctgtcagtggctggagagattatcggtcttggc
aacgtttggaggttcccatatctgtgttacaagaacggcggaggtgctttctttgtgcct
tatgtcatcttcttcgtctgctgtgggatcccagtcttcttcctggaaacagcactaggt
cagttcactagtgaagggggcatcacatgttggagaaaagtctgcccactctttgaaggc
attggttatgcgacccaagtcatcgaagcccacctgaatgtttattatgtggttatattg
tcttgggccattttctacctgttcaactgctttacatcagagctgccctgggcgtcgtgt
ggtcactactggaacacggaaaactgtgtggattttaacaatgaaagcattgccaacttc
accaacccatattccacatcaccagtcattgagttttgggaacgccgtgttctcaagata
tcctctggaattgaagaagttggcagccttcgctgggagctcgctttctgtctacttcta
gcttggatcatatgctatttctgcatttggaaaggtccaaagtcaactggaaaggtggtg
tatgtcactgcaacctttccttatttcatgctgttgatccttcttattcgaggaatcaca
ctgccaggagctgcaaatggaattaaattctacctgtaccctgatatgtctcgtctgtca
gatcctcaggtgtgggtggatgcaggcactcagatcttcttctcgtatgctatatgtctg
ggttgtttaacggctctcggcagctacaacagctacaacaacaactgctacagggattgc
ctcatgctgtgctgtctgaacagtggcacgagtttcgtggcaggatttgccatcttctcc
gtcttgggcttcatggcatatgaacagaatgtgccaatagaggcagtggcagagtcaggt
cctggtctggcgtttatagcgtaccctaaggctgtgaccatgatgccctggtctccactg
tgggcctgcctcttcttcatgatgctcatcttcctcggactcgacagtcagtttgtgtgt
gtggagagtcttgtgaccgcggtcatcgacatgtatcccaaaaccttccgcgtgggatat
cggagagagctactcatcctgggaatgtctgtggtctccttcttcctgggtctaataatg
ttaacagagggtggcatgtacgtgttccagctcttcgacgcgtatgcagccagtggcatg
tgtctgctgttcgtggccatctttgagtccatctgcattggctggatctatggtgccgac
aggttttattcgaacattgaggacatgattggatacaagcccatcttcttcatcaaatgg
tgctggaagtacttcacacccggcatctgtgctggcatctttctgttcttcttgatcaag
tacaaaccgctgatgtataataatgtgtacacgtatccagactggggttatgggatcggc
tggatgatggccatgtcctctatggtttgcattcctgtgggaatcatagtccagatctgg
aaaacgaaaggaactttccgtgaggtaaaagccttttttttattctag
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