Rhinichthys klamathensis goyatoka (western speckled dace): 130094911
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Entry
130094911 CDS
T09701
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03320
PPAR signaling pathway
rkg04120
Ubiquitin mediated proteolysis
rkg04137
Mitophagy - animal
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130094911 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130094911 (ubc)
04137 Mitophagy - animal
130094911 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130094911 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130094911 (ubc)
Ubiquitin system [BR:
rkg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
130094911 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
130094911
NCBI-ProteinID:
XP_056117419
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagacgctgactggcaagaccatcactcttgaggttgagcccagc
gacaccattgagaatgtaaaggccaagattcaggacaaggaaggcattcctcctgaccag
cagcgtctgatcttcgctggcaaacagttggaagatggacgcacactgtccgactacaac
atccagaaggagtccaccctccatctggtgctccgcctcagaggtggaatgcagatcttc
gtcaagaccttgactggcaagaccatcactcttgaggttgagcccagcgacaccattgag
aacgtcaaggccaagatccaggacaaggaaggcattcctcctgaccagcagcgtctgatc
ttcgctggcaaacagttggaagatggacgcacgctgtccgactacaacatccagaaggag
tccaccctccatctggtgctccgcctcagaggtggtatgcagatcttcgtaaagacccta
actggcaagaccatcactcttgaggttgagcccagcgacaccattgagaacgtcaaggcc
aagatccaggacaaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaa
cagttggaagatggacgcacactgtccgactacaacatccagaaggagtccaccctccat
ctggtgctccgcctcagaggtggaatgcagatcttcgtaaagaccctaactggcaagacc
atcacacttgaggttgagcccagcgacaccattgagaatgtcaaggccaagatccaggac
aaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaacagttggaagat
ggacgcacgctgtccgactacaacatccagaaggagtccaccctccatctggtgctccgc
ctcagaggtggtatgcagatcttcgtaaagactttgactggtaagaccatcacacttgag
gttgagcctagcgacaccattgagaacgtcaaggccaagatccaggacaaggaaggcatt
cctcctgaccagcagcgtctgatcttcgctggcaaacagttggaagatggacgcacactg
tccgactacaacatccagaaggagtccaccctccatctggtgctccgcctcagaggtgga
atgcagatcttcgtaaagaccctaactggcaagaccatcacacttgaggttgagcccagc
gacaccattgagaatgtcaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagcgtctgatcttcgctggcaaacagttggaagatggacgcacactgtccgactacaac
atccagaaggagtccaccctccatctggtgctccgcctcagaggtggtatgcagatcttc
gtaaagaccctaactggcaagaccatcacacttgaggttgagcccagcgacaccattgag
aatgtcaaggccaagatccaggacaaggaaggcattcctcctgaccagcagcgtctgatc
ttcgctggcaaacagttggaagatggacggacactgtccgactacaacatccagaaggag
tccaccctccatctggtgctccgcctcagaggtggtatgcagatcttcgtaaagacccta
actggcaagaccatcacacttgaggttgagcccagcgacaccattgagaatgtcaaggcc
aagatccaggacaaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaa
cagttggaagatggacggacactgtccgactacaacatccagaaggagtccaccctccat
cttgttctgcgtcttcgtgggggcaattaa
DBGET
integrated database retrieval system
