Rhinichthys klamathensis goyatoka (western speckled dace): 130106415
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Entry
130106415 CDS
T09701
Symbol
lrrtm1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130106415 (lrrtm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRRNT
LRR_6
Motif
Other DBs
NCBI-GeneID:
130106415
NCBI-ProteinID:
XP_056128494
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MLMDFLLIGLYLKWPLRKPPGLILCSLGIVLKIVPLVGGSCPRPCRCDNKLLYCEGLNLT
DIPQNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRVKDX
DLSTNRIESLPNGTFRPLPNLRILDLSYNKLQSLEPDLFHGLRKLTNLHLRYNALKFIPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPXLISLRTL
YMRNNKATIVVSTLDWTWDHLEKIDFSNNEIENIEPHVFESVPNLNILMLDSNKLTYINQ
RILDSWNSLE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttccttctaattggtctgtacctaaagtggcccctaaggaagccacct
gggctgattctgtgctccctgggcattgttctgaaaatagttccgttggtgggggggagc
tgtccgaggccatgccgatgcgacaacaagctgttgtattgtgaggggctcaacctgact
gacatccctcaaaatctgagcagtgccattggtttgtccctgcgcgagaataacatctct
gagctgcgggaggggaactttgtgggcctgtcacagcttacctggctctacttggatcat
aacaatattgagatcgtggaggagagcgcctttgaaaggctgcgaagggttaaagatntg
gatctgagcaccaatcggatagagagcctgcccaacgggacctttagacctctgcccaac
ctgcgaatattggatttatcctataacaaacttcagtccttagagccagaccttttccat
ggccttaggaagcttaccaatttacatttgcgctacaatgcccttaaattcatccctgtg
cggattttccaggattgcagaagcatgcaattcctggatctgggttacaaccagctgcag
agcctggcacgtaattcatttgccggactcttcaagctcactgaactgcatctggagcac
aatgaattggtgaaagtcaatctggcccatttccccngcctcatatccctgcggaccctc
tacatgcgaaacaataaggccaccattgtggtcagcacccttgactggacctgggaccac
ttggagaagattgacttttccaataatgagattgagaacattgaaccacatgtgtttgaa
agtgtgcccaaccttaacattcttatgctggactctaataaactgacttacataaatcag
cggattttggactcttggaattccctcgag
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