Rhodococcus koreensis: JWS14_04415
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Entry
JWS14_04415 CDS
T07497
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rko
Rhodococcus koreensis
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rko03051
]
JWS14_04415 (pafA)
Enzymes [BR:
rko01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
JWS14_04415 (pafA)
Proteasome [BR:
rko03051
]
Prokaryotic proteasome
Bacterial regulatory particles
JWS14_04415 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QSE78436
LinkDB
All DBs
Position
complement(974784..976142)
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDNLIQLVNHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSY
GCHENFLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSESTTMLKVGTAALVLEMIEAGVSF
RDFALDNPIRAIREVSHDVTGRRPVRLAGGRQASALDIQREYHARAVEHLQNRDPDPQVT
QVVDLWGRMLDAVETQDFAKVDTEIDWVIKRKLFQRYQDRHGFELADPKIAQLDLAYHDI
KRGRGVFDVLQRKGLVKRITEDETIEAAVDTPPQTTRAKLRGEFITAAQEAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggaattgagacagagttcggtgtgacctgcaccttccatggt
cacaggcgactgagcccggacgaggttgcgcgctacctgttccggcgggtggtgtcgtgg
ggccggagttccaacgtgttcctcaggaacggtgcccgcctgtatctggacgtcggctcg
caccccgaatacgcgacagccgagtgcgacaacctcatccagttggtcaaccacgaccgg
gcgggtgagcgcgtcctcgaggagttgctgatcgacgccgagcagcggctcgccgaggaa
ggcatcggcggcgacatctacctgttcaagaacaacacggactcggcgggtaattcgtac
ggctgtcacgagaacttcctcgtggcgcgggccggcgaattctcccggatctcggacgtg
ctgctcccgttcctggtgacgcggcagctgatctgcggcgccggcaaggtactgcagacg
ccgaaggcggccacgttctgcctgtcgcagcgcgccgagcacatctgggagggcgtgtcc
tcggcgaccacgcggtcgcggcccatcatcaacacccgcgacgagccgcacgccgacgcg
gagaagtaccgccgcctgcacgtgatcgtcggcgattccaacatgtccgagtccaccacg
atgctgaaggtgggcacggcggcgctcgtgctcgagatgatcgaggccggggtgtcgttc
cgcgacttcgcgctcgacaacccgatccgcgccatccgcgaggtcagccacgacgtcacc
gggcgccgcccggtgcggctcgcaggcggcaggcaggccagcgccctcgacatccagcgg
gagtaccacgcccgcgccgtcgaacacctgcagaaccgcgaccccgatccgcaggtcacg
caggtggtcgacctgtggggccgcatgctggacgccgtcgagacgcaggatttcgcaaag
gtcgacacggagatcgactgggtgatcaagcgcaagctgttccagcgctaccaggaccgg
cacggcttcgaactggccgacccgaagatcgcgcaactcgatctggcgtaccacgacatc
aaacgcggtcgcggcgtgttcgacgtgctgcagcgcaagggtctggtgaagcggatcacc
gaggacgagaccatcgaggccgcggtggacactccgccgcagaccacccgggcgaagctg
cgcggcgaattcatcaccgccgcgcaggaggccggacgcgacttcacggtcgactgggtg
catctcaagctcaacgaccaggcccagcggaccgtgctgtgcaaggacccgttccggtcg
gtcgacgagcgggtggagcggctgattgcctcgatgtag
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