Rhodococcus koreensis: JWS14_11380
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Entry
JWS14_11380 CDS
T07497
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWS14_11380 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rko03400
]
JWS14_11380 (xth)
Enzymes [BR:
rko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JWS14_11380 (xth)
DNA repair and recombination proteins [BR:
rko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JWS14_11380 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QSE79707
LinkDB
All DBs
Position
2437999..2438802
Genome browser
AA seq
267 aa
AA seq
DB search
MRIATWNVNSVRARTDRILDWLQRSDVDVLAMQETKCKDEQFPYERFRELGYEVAHVGLS
QWNGVAIASRVGLDDVQIGFEDQPGFHKDPEVAPAQEARAIGATCNGVRIWSLYVPNGRE
LADPHYTYKLEWLAKLHTDAVGWLDRNPDAQIALVGDWNVAPTDEDVWDPALFEGKTHTS
VPEREAFQAFVESGFADVVRPHTPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPALAGRV
DKAEIDRNERKGKGASDHAPVIVDLGD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatcgcaacctggaacgtgaactctgttcgtgcccgtaccgaccggatcctggac
tggctccagcggtccgacgtcgacgtgctggcgatgcaggaaaccaagtgcaaggacgag
cagttcccgtacgagcggttccgcgaactggggtacgaggtcgcgcacgtgggcctcagc
cagtggaacggtgtcgcgatcgcgtcccgtgtcggtctcgacgacgtgcagatcggcttc
gaggatcagcccgggttccacaaggacccggaggtcgcgcccgcgcaggaagcccgcgcc
atcggcgccacctgcaacggcgtccgcatctggagcctgtacgtccccaacggccgtgag
ctcgccgatccgcactacacgtacaagctggagtggctggcgaagctgcacacggatgcg
gtcggatggctggaccgaaatccggacgcgcagatcgcgctggtcggcgactggaacgtc
gcgcccaccgacgaggacgtctgggatccggcgctgttcgagggcaagacccacacgtcc
gtccccgagcgcgaggccttccaggcgttcgtcgaatcgggattcgccgatgtcgtccgt
ccgcacaccccgggcccgggtgtctacacctactgggactacacccagctgcggttcccg
aagaagcagggaatgcgcatcgacttcgtgctcgggtcgcccgccctcgcgggccgtgtc
gacaaggccgagatcgaccgcaacgaacgcaagggcaagggcgccagcgatcacgcgccg
gtcatcgtcgacctcggcgactga
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