Rhodococcus koreensis: JWS14_22880
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Entry
JWS14_22880 CDS
T07497
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03030
DNA replication
rko03430
Mismatch repair
rko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWS14_22880
03430 Mismatch repair
JWS14_22880
03440 Homologous recombination
JWS14_22880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rko03032
]
JWS14_22880
03400 DNA repair and recombination proteins [BR:
rko03400
]
JWS14_22880
Enzymes [BR:
rko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWS14_22880
DNA replication proteins [BR:
rko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWS14_22880
DNA repair and recombination proteins [BR:
rko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWS14_22880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
DnaX_C
AAA_16
AAA_19
AAA_30
Rad17
AAA_5
Mg_chelatase
AAA_14
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QSE81795
LinkDB
All DBs
Position
4976121..4978364
Genome browser
AA seq
747 aa
AA seq
DB search
MALYRKYRPASFAEVVGQEHVTEPLSTALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGQCPSCVALGPGGSGNLDVTELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLAPT
TMRGLLEKICQQESVPVADPVYPLVIRAGGGSPRDSLSILDQLLAGAGNEGVTYPRALAL
LGVTDVALIDDAVDALATGDGAALFGTVDRVMDAGHDPRRFAVDLLERLRDLILMQAVPD
AAERGLVDAPGDVLEHMRAQVQRIGPATLTRYAEVIHAGLGEMRGATAPRLLLEVMCARM
LLPSASDAESAVLQRLERVERGLPPAGSAPVAAAAERPAAAPERAPQPPAEPEPEPKFQR
PSMRQAAAATVPPPPEPEPEPMPRPVPEPAPAPVPEPEPTPQPEPTPVPEPAPEPTPRPV
PEPAPEPAPTPAPEPEPAPAPTPAPEPTPEPEPEPPLAPEVEAAPAASAGPDAAVLREAW
NSLREKVSQRNKILPAMLSAATVHDVQGNRLILAHPVPNLGARIASPHNAQVITEVLSEM
FGGTWEVEYQAGAPTAPPPPAAKAAAAPTKPAGAPRFSRPSQERAAQRPQQQSDARSTDA
GPGAAQARPSSEPDDDIPPPEAPDYPDDPGPIDYEASASTPPVSTPEDEEEMFKEAAEPA
DPATRRDPEDVAFELLKDMLGAKKLEG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgtaccggaagtaccgacccgcatccttcgccgaggtggtggggcaggagcac
gtcaccgaaccactgagcaccgctctcgacgccggacggatcaaccacgcgtatctgttc
tccggtccccgcggctgtggcaagacgtcgtctgcccgcatcctggcccgatcgctgaac
tgcgtggagggcccgacctcgacgccgtgcggccagtgcccctcgtgcgtggcgctcggc
cccggcggctcgggcaacctcgacgtcaccgaactcgacgcggccagccacggtggcgtc
gacgacacccgtgaactgcgcgaccgcgcgttctacgcgcctgccgagtcccggtaccgg
gtgttcatcgtggacgaggcccacatggtcaccacggcgggtttcaacgccctcctcaag
atcgtggaggagccgccggagcacctcatcttcatcttcgcgaccaccgaacccgagaag
gtgctgccgaccatccgttcgcgcacccatcactacccgttccggctgctcgcgccgacg
acgatgcgcgggttgctggagaagatctgccagcaggagagcgtgccggtcgccgacccg
gtgtatccgctggtcatccgtgccggcggcgggtccccgcgtgactcgctgagcatcctc
gaccaactcctcgccggcgccggcaacgagggcgtcacctacccgcgcgcgctcgcgctg
ctcggcgtcaccgacgtcgcgctgatcgacgacgccgtggacgcgctggccaccggcgac
ggtgccgcactgttcgggacggtcgaccgcgtcatggacgccgggcacgatccgcggcgc
ttcgccgtcgacctgctcgagcgcctccgcgacctcatcctgatgcaggccgtccccgac
gccgccgaacgcggcctcgtcgatgcacccggcgacgtgctcgagcacatgcgcgcccag
gtccagcggatcggtcccgcgacgctcacccgctacgccgaggtgatccacgccggtctc
ggcgagatgcgcggcgccacggccccccgcctgctgctcgaagtgatgtgcgcccggatg
ctgctgccgtccgcgtccgatgcggagtcggccgtgctgcagcggctcgaacgcgtcgag
cgcggacttccgcccgcaggctccgcgccggtcgccgccgcagccgagcggcccgccgcg
gcaccggagcgcgcgccgcaaccgcccgccgaaccggaacccgagccgaagttccagcga
ccgtcgatgcgccaggccgcggcggccaccgtgccgccgccgcccgagccggaacccgag
ccgatgccgcggcctgttccggagcccgcgcccgcccccgttcccgaaccggagccgacg
cctcagcccgagccgacacccgttccggagccggcacccgagccgacgccgcggcccgtg
cccgagccggcacccgaacccgcgccgactcctgcacccgagccggaacccgctcccgct
cccactcctgcgccggagccgactcccgaaccggagccggagccgccgctcgcacccgag
gtggaggcggcacccgccgcatccgcgggtccggatgctgcggtcctgcgcgaggcctgg
aattcgctgcgcgagaaggtaagccagcggaacaagatcctgcccgcgatgttgtccgcc
gccacggtgcacgacgtgcaaggcaaccgcctgatcctggcgcacccggtccccaatctg
ggcgctcggatcgcgtcgccgcacaacgctcaggtgatcaccgaggtgctgtccgagatg
ttcggcggcacctgggaagtggagtatcaggccggtgccccgacggcgccgcccccaccg
gccgcgaaggctgccgcggcgccgacgaagcctgcaggcgcaccccggttctcccggccc
agccaggagcgggctgcgcagcgcccgcagcagcagtccgacgcacggagcaccgatgcg
ggtccgggtgcggcgcaggcacgtccgtcgtccgaaccggacgacgacattccgccgccg
gaggcaccggactacccggacgatcccgggccgatcgactacgaggcttcggcgtcgacg
ccgcccgtctccacacccgaggacgaagaagagatgttcaaggaggcggcggaacccgcc
gaccccgcgactcgccgcgacccggaagacgtggcgttcgaactgctcaaggacatgctc
ggggccaagaagctcgaaggctga
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