Rubripirellula lacrimiformis: K227x_10900
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Entry
K227x_10900 CDS
T07352
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K227x_10900 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlc03019
]
K227x_10900 (recQ_1)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_10900 (recQ_1)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K227x_10900 (recQ_1)
Messenger RNA biogenesis [BR:
rlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K227x_10900 (recQ_1)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K227x_10900 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Peripla_BP_4
HTH_27
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-ProteinID:
QDT02712
UniProt:
A0A517N6F8
LinkDB
All DBs
Position
complement(1471578..1474568)
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AA seq
996 aa
AA seq
DB search
MADTSDPTALLGRFGLTSFRPGQREVVDAVASGKDVMCVMPTGGGKSLCYQLPSLARSGT
TIVVSPLIALMKDQVDALQNLGIAARLINSTLSASQQTDVMNEMAAGKLDLVYVAPERLR
NSRFLEATESAGITLLAIDEAHCVSEWGHDFRPDYSRLGRFRRRYLNNVQTIALTATATP
LVRDDVIEILGLDHPQTFVTGFARTNLRFSVSPAKTDQEKNDTLLAYLQSQTGSGIIYAA
TRKRCEELADWLPEKVRRPIGVYHAGLDPGQRRKVQDDFMSGKLSAIVATNAFGMGIDKS
DIRYVVHYNMPGSLEAYYQEAGRAGRDGLNSECRLLFSYSDRYIQEFFIDNRYPSKETVR
KVYEFLLTREEDPIELTLDQVREAIDVKDGSESIGTAQTLLAKSGVLRRLDPNANYAMLR
IDSDAPSMLDYLPKEAKIRRKVMLAIEKIVGRRRHEDVFVRPARLQEMADVKKDQLTRTL
RELRRLKAFDYVPPFRGRAVHFTDRDRSFDELQIDFAELAQRKAAETEKLESVIQFARTS
GCRQRVILSYFGETEADNCGTCDRCAPNDGSVGRGSDVSLTIAMKGVDPVSLLRGIRVVL
SGVTRMHGRFGKILVAQMLCGSKSKKLQQWRLNRLSTYGLLSELKQSEVVAVMDALTESG
LLEQKEVDERRPTIHMTEAGKQVMLGNAPLPPSVRLSPPLAKRLSRASREIESGDVQTES
AGTDSESTTPDADAAPPDASEATTAEVLETLKRWRRKTAAALGIPAFRVLTNSTMQRVAQ
ASPRNSAQLENIAGVGSATIEQFGYDLIQLISTALDEIEGSPCVELESPSLDGDQDGGSK
DSDAAPATSAAAISAQATSAAATPSPADPPPVPESAGSATSDSVPATTGAGTPATPTAPS
GIIAADTPDASPTSGAESAQLADAPDVGDAYWTWRLFRDGYSAHQVAEIRRCDKEAVIND
LVKAALTGHTVDPNWADSPQGSQRIRRAVSSDTIVG
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacctcggatccaactgcactgctaggccgttttggactgaccagtttccgg
cctggccagcgagaagtcgtcgatgccgtcgccagcggcaaagatgtgatgtgtgtgatg
cccaccggcgggggcaagagcctgtgttaccagctgcccagcttggctagatccggtacg
accatcgtcgtttcgccgctgatcgcgctgatgaaggaccaggtcgacgcgcttcagaac
ctgggcatcgcggcccgattgatcaacagcactttgtcggcctcgcagcagaccgatgtg
atgaacgagatggcggcgggcaaattggacctggtctacgtcgctcccgaacgacttcgc
aacagccgttttctagaagcgaccgaatcggctggcatcacgttgttggcgatcgacgaa
gcccactgcgtcagcgaatgggggcacgatttccggcccgattattcgcgtttgggtcgg
ttccggcgacgttacttgaacaacgtccaaacgatcgcgttgaccgcgacggccacgcca
ctggtccgcgacgacgtgatcgaaatcttgggtttggatcacccccaaacctttgtgacc
gggttcgcccgtaccaatcttcggtttagtgtttcgcccgcgaagacggatcaggaaaag
aacgacacactgctggcttacctgcaatcacaaaccgggtccggcatcatctatgccgcc
acacgcaaacgatgcgaggaactggccgactggttgccggaaaaggtgcgccgcccgatc
ggtgtctatcatgccggactggaccctgggcaacgccgcaaagtccaagacgacttcatg
tcgggcaaactgtccgcgatcgttgccaccaacgcgtttggcatgggcatcgacaagtcg
gacatccggtatgtcgtccattacaacatgccaggcagcttggaagcgtattaccaagag
gcgggcagggcagggcgagacggattgaacagtgaatgccgtttgctgttttcgtacagc
gatcgatacatccaagaattctttatcgacaaccgctatccgtccaaagaaaccgtccgc
aaggtttacgaattcctgctgacacgcgaagaagacccgatcgaattgactttggaccaa
gttcgcgaagccatcgacgtcaaagacggcagcgaatcgattggaaccgcgcaaactctg
ctggcgaaatccggtgtgctgcggcgactcgatccgaacgccaactacgcgatgctgcgg
atcgacagcgatgcaccatcgatgctggactatttacccaaagaagccaagattcgtcgc
aaggtcatgttggcgattgaaaaaatcgttggccgtcggcgacacgaagacgtcttcgtt
cgcccagctcgactgcaagaaatggccgacgtcaaaaaggaccaactgacacggacgctg
cgggaactgcgacgcctgaaagcgtttgactatgtgccgccgttccggggccgagcggtg
catttcaccgaccgtgaccgcagctttgacgaactgcagatcgacttcgccgaactcgca
cagcggaaagctgcggaaaccgaaaaacttgaatcggtcatccagtttgctcgcacgtcg
ggttgccgccaacgagtcatcctgagctacttcggcgaaaccgaagccgacaactgtggc
acctgtgaccgatgtgcccccaacgatggcagcgtcggacgcggatccgatgtctcgctg
acgatcgccatgaaaggcgtcgacccggtttcgctgctgcgcggcatccgagtagtgctt
agcggcgtgacacggatgcacggacggttcggaaaaatcttggtcgcccagatgctgtgc
ggatccaaaagcaaaaaactgcaacagtggcgactgaaccggctcagcacctacgggctg
ttgtcagaactgaaacagtccgaagtggtggcggtgatggacgcgttgaccgaatcggga
ttgctagaacaaaaagaagtcgacgaacggcgaccaacgatccacatgaccgaagctgga
aaacaggtgatgttgggcaacgcgccgctgccgccatcggtccgcctatcaccgccgttg
gccaagcgattgtcgcgggcatcacgcgagatcgaatcgggggacgtgcaaaccgaatcg
gccggcaccgattccgaatcgaccaccccggacgccgacgctgcgccgcccgacgcttcc
gaagccacgacggccgaagtcctggaaactctgaaacgatggcgtcgcaagacagccgcg
gcgctggggatcccggcattccgtgttttgaccaactcgaccatgcagcgagtcgcacag
gcatcacctcgaaattccgctcaattggaaaacatcgccggcgtcggttcggcgacgatc
gaacaattcggctacgacctgattcagctgatcagcaccgccttggacgaaatcgagggc
agcccctgtgtcgaactggaatctccatcgctggacggggatcaggatgggggatcgaaa
gattcggacgcggccccagcaacatcggccgcggcaatatcggcacaggcaacatcggcc
gcggcaacaccgtcaccagcggatccgccccccgtgcctgagtccgctggttctgcgacc
agcgattctgtaccggcaacgaccggggccggcacccccgcgacaccaacggccccatct
gggatcatcgcggcggacaccccggatgcatcccccacgtcgggcgccgaatcggcccaa
ctggcggacgccccggacgttggcgacgcttactggacgtggcgactgttccgcgacggc
tattctgcccaccaagttgccgaaatccgtcgatgtgacaaagaagcggtcatcaatgat
ctggtgaaggctgcgttaaccggccacactgtggaccccaactgggcggattccccccag
ggatcccagcgaatccgccgcgccgtgtcctccgacaccatcgtcggttag
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