Rubripirellula lacrimiformis: K227x_51740
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Entry
K227x_51740 CDS
T07352
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K227x_51740 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlc03021
]
K227x_51740 (rpoB)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_51740 (rpoB)
Enzymes [BR:
rlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K227x_51740 (rpoB)
Transcription machinery [BR:
rlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K227x_51740 (rpoB)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K227x_51740 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RskA_N
Motif
Other DBs
NCBI-ProteinID:
QDT06758
UniProt:
A0A517NI51
LinkDB
All DBs
Position
complement(6825893..6829618)
Genome browser
AA seq
1241 aa
AA seq
DB search
MATTSHRRLEPTTVRHFGTGLGGNFELPDLTALQTASYAEFLQEHTDSRSRKLHGLESVL
HEIFPISSYDGNTTLEYLYYELGKPRYTSQECRQLRLTYGRPLRIWLRLNREEPLEEEVY
LGDLPIMLGGGEFIINGAERVVVSQLHRSPGVDFVLEQDTTTDRKLPSCRVIPERGSWIE
VNVTKKDALTVRIDQSGKFSATTLLRAMDPKYSTDADILNAFYETGTIKIGSSKSAESIE
GKIAVDDVVYPSESERAGEIIVEAGHKISKEVAEIICTAGVKSIDAMDAPKIPLIFNSLI
DDNTASHEEALLRIYQRLRPGNPPQLEKARTLFTEKFYDDNRYRLGKVGRFRLNRKLGLE
VPETEMCLRPDDMISAIRYLIDLFDADSKAEIDDIDHLGNRRLRTIDELASEELRKGFLK
LRRTVQERMSIKDATDMSPRSLINPKSVSAAIDYFFGRGELSQVVDQTNPLSQLAHERRL
SALGPGGLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLAIFAGVDDYGFLITP
YRKIKEGKVTDETVWLRADEESESYVAPADTEVTDGALVPGPNMIARFRSDFQIVQPEQV
HYMDVAPAQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVAEPPIVGTGMEREVAK
NSAMVVRARRAGKVTYVDSTRIEIGSDHYDLKKYEGLNERTCQNQRPIIGLGDKVEKNQI
IADGAATQNGELALGRNVLVGFMSFDGYNYEDAIIISEELVRNDTYTSIHIEDFDVEIRE
TKLGREEFTRDIPNVSEKALRNLDDSGIVNVGTYVKPGDILVGKVSPKSKTELTPEEKLL
HAIFGRAGEDVKNDSLEVPSGIEGIVIDTHKFSRRMSLSEDERKAFERDLKEAESEGNGE
IASTFEALVRDLEEAAGMKLKDSTGTPLADGQDPKFVAERATGFRIDHLLDQVKDEEKKA
EVEKVFAQQWTNVEQAIDTRDRALNSMKRGDELRSGVLQMVKIYVATKRTISVGDKMAGR
HGNKGVIAKILPIEDMPFLPDGTPIQIMLNPLGVPSRMNVGQILETHLGWAGAKLGFQAI
TPVFDGATEGDINKCLAEAGLPAHGKIRLTDGRTGEAMEQETTVGYIYMLKLHHLVDDKV
HARSTGPYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTK
IYESMVKGENTLEAGTPASFDVLTNEIRGLALNMQLEKRAI
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaccagtcaccgtcgactagagccgacaactgtccgtcacttcggcaccggt
ttgggaggcaatttcgagcttccggacctgaccgctctgcagaccgcttcgtacgctgag
tttcttcaggagcacacggattctcgtagccgcaagctgcatgggttggaatccgttctg
cacgagatctttccgatcagcagttacgacggcaatacgacgctggagtacctgtactac
gaactgggcaagcctcgctacaccagccaagagtgtcgtcagctgcgtttgacctatggt
cgcccgctgcgaatctggttgcgattgaatcgtgaagaaccgttggaagaagaggtctat
ctgggtgacctgccaatcatgttgggcggtggtgaattcatcatcaacggtgccgaacgg
gtggtcgtcagccagttgcaccgtagtcccggtgtcgacttcgttctggaacaggacacg
accacggaccggaaactgccttcgtgccgcgtgatccctgaacggggttcgtggatcgaa
gtcaacgtgaccaagaaagatgcgttgacggttcggattgaccagagcggtaagttctcg
gccaccacgctgctgcgtgcgatggatccgaagtattcgaccgacgccgacatcctgaac
gcgttctacgaaaccggcacgatcaagatcggcagcagcaagtcggctgaatcgatcgaa
ggcaagatcgcggttgacgatgtggtgtatccgagcgaatcggaacgagctggcgaaatc
atcgtcgaagccggccacaaaatcagcaaggaagttgccgagatcatctgcaccgccggt
gtgaaaagcatcgacgcgatggatgcgccgaagatcccattgatcttcaactcgttgatc
gatgacaacaccgccagccacgaagaagcgttgctgcggatctatcagcgtctgcgtccg
ggcaacccgccgcagcttgaaaaagcgcgcacgttgttcaccgagaagttttacgacgac
aatcgataccggttgggcaaggttgggcgtttccgcttgaatcggaagctaggcctggaa
gtgcccgagacggagatgtgtctgcgtcccgacgacatgatctcggcgatccgatatctg
atcgatctgtttgacgccgacagcaaggcggaaatcgacgacatcgaccacctgggcaac
cgtcgtctgcgaacgatcgacgaattggccagcgaagaactccgaaagggattcttgaag
cttcgccggaccgttcaggaacggatgagcatcaaggacgcgaccgacatgtcgccgcgt
agcctgatcaaccccaagagtgtttctgcggcgatcgactacttctttggtcgtggcgaa
ctttcgcaggtggttgaccagacgaacccgttgtcgcaactggctcacgaacgtcggctt
tcggcactgggcccaggcggtttgaaccggaaacgagctggttttgaagttcgcgatgtt
cacatttcgcactacggacgtatctgtcctatcgaaacgccggaaggcacgaacattggt
ctgatttcgtcgttggcgattttcgcaggcgtcgatgactacggtttcttgatcacgcct
taccgcaagatcaaggaaggaaaggtcacggacgaaacggtttggttgcgtgcggacgag
gaaagcgaatcctatgtcgcgcctgccgataccgaggtcaccgacggggctctggttccc
ggtccaaacatgatcgctcggttccgcagtgacttccaaattgtgcagcctgaacaggtc
cactacatggacgtcgcaccggcccaaatggtaggtgtgtcggccgggttgatcccgttc
ttggagcatgatgatgcgaaccgtgctttgatgggatcgaacatgcagcggcaagctgtg
ccgttgttggtcgccgagcctccgatcgtcggaacggggatggaacgcgaagtcgccaag
aacagtgcgatggtcgtacgtgctcgccgtgccggcaaagtcacctacgtcgattcgact
cgcatcgaaatcggcagcgatcactatgacctgaagaaatacgaaggcctgaacgaacgg
acctgtcaaaaccaacgtccgatcatcggtcttggcgacaaggtcgaaaagaatcagatc
atcgctgacggtgctgccacccagaatggtgaattggcactcggacgcaacgtgttggtc
ggattcatgtcgtttgacggctacaactacgaagatgcgatcatcatcagcgaagaattg
gtgcggaacgacacttatacgtcgattcacatcgaagacttcgatgtcgaaattcgcgaa
acgaagctcggccgcgaagaattcactcgcgacattcccaacgtttccgaaaaggctctg
cggaacctggacgacagcgggattgtgaacgtcggtacctacgtcaaaccgggcgatatc
ctggtcggcaaggtgtcgccgaagagcaagacggaattgactccggaagaaaaactgttg
cacgccatcttcggtcgtgccggtgaagacgtgaagaacgattcgctggaagtgccatcg
gggatcgaaggtatcgtcatcgatacgcacaaattcagtcgccgtatgagtctgtccgaa
gacgagcgaaaggcgttcgaacgagacctgaaggaagccgagagcgaaggtaacggcgaa
atcgccagcaccttcgaagccttggttcgtgatctggaagaagccgccggcatgaagctg
aaggattcgaccggaacgccattggccgacggtcaagatcctaagttcgtcgccgaacga
gccaccggattccgcatcgatcaccttttggatcaggtcaaagacgaagaaaagaaggcc
gaggtcgagaaggtctttgcccaacagtggaccaacgttgaacaagccatcgatactcgc
gaccgtgccctcaacagcatgaagcgtggcgatgaacttcgcagcggtgtgttgcagatg
gtcaagatctatgtcgctaccaagcgaacgatcagcgtcggtgacaagatggccggtcgt
cacgggaacaagggtgtgatcgccaagatccttccgatcgaggacatgccgttcttgccc
gatggtacgccgatccaaatcatgctgaacccactgggcgttccatcgcggatgaacgtg
ggacagattttggaaactcacctgggttgggctggtgccaagcttggattccaagcgatc
acgcctgtctttgatggtgcgaccgaaggcgacatcaacaagtgtctggccgaagccggt
ttgccggctcacggtaagatccgtttgaccgatggtcggacgggcgaagcgatggagcag
gaaacgaccgtgggctacatctacatgttgaagctgcaccacttggtcgacgacaaggta
cacgcacgatcgacgggcccttactcgttgatcacccaacaaccgctcggtggcaaggcc
cgcttcggcggccaacgcttcggagaaatggaagtgtgggcgttggaggcatacggtgct
gcttacatcttgcaagagttgttgacggtcaagagcgacgacgtcgaaggacgtacgaag
atctacgaatcgatggtcaagggcgagaacacgttggaagccggtacgccggcatcgttc
gacgttctaaccaacgaaattcgtggtctggcgctcaacatgcagttagaaaaacgagcg
atctga
DBGET
integrated database retrieval system
