Rubripirellula lacrimiformis: K227x_56680
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Entry
K227x_56680 CDS
T07352
Symbol
recQ_6
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K227x_56680 (recQ_6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlc03019
]
K227x_56680 (recQ_6)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_56680 (recQ_6)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K227x_56680 (recQ_6)
Messenger RNA biogenesis [BR:
rlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K227x_56680 (recQ_6)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K227x_56680 (recQ_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QDT07242
UniProt:
A0A517NJC2
LinkDB
All DBs
Position
complement(7497139..7498662)
Genome browser
AA seq
507 aa
AA seq
DB search
MGVPERPPTVFRTMHATQKLSSRLSDNFGFDTFRPGQHQACSAAMQGRDTLVLMATGSGK
SLCYQLPGLELEGVTVVVSPLISLAEDQAAHIRELGTHAAVLNSSKSKKQICQYREDIRS
GKAEFVFTTPERLQQSDICDLLAEVGVDIFVIDEAHCASQWGHDFRPDYLCLHHARQRLG
NPPILAMTATASPKTIVEIIRCLKLSDPEMIATGITRPNLRLDVVACVGEKEKTSALRDL
FQAESDLDANEPAIVYCATTKTCERLRDELSDLPMPTLCYHGRMKQSLRSESQSAFMDGP
PAVMFATNAFGLGIDKPDIRRVVHYDLPGSLEAYYQEAGRAGRDGSAAACTLFFDREDIG
LQKMFASGAIDSSQLMTAHHTLVKGIERWGDDGDGVSLTDLKRISPLGRQTLKQCLQQLA
ARGYAAPAGRGRWACLLDTIDHAVTDGIAADARMRCEDRRIAIDQMVSYAESSECRWTIL
QKHFETSSASDQLCRCGNCGGVDADVA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgggagttcccgaacgaccacccaccgtttttcgaaccatgcacgccacccaaaaacta
agctcgcggctttccgataacttcggtttcgacacttttcgtccggggcaacatcaagcg
tgcagcgccgcgatgcaagggcgagacacacttgtgctgatggcgactggttctggcaaa
agtctgtgttaccagttgcccggcttagaactcgaaggcgtcaccgtcgttgtcagcccg
ctgatctctttggccgaagatcaagccgcccacatccgagaattagggacgcacgctgcc
gtcctgaacagttccaaatcgaagaagcagatctgtcagtatcgggaagacatccgatcc
ggcaaagcggagtttgtgttcaccactcccgaacgcttgcagcagtccgatatttgcgac
ctgctcgccgaggtcggcgtggacattttcgtgatcgacgaagcgcattgtgccagccag
tggggacatgattttcgtcccgactacctctgtcttcatcatgctcgccagcgattaggg
aatcccccaatccttgcaatgacggccacggcatcgccaaaaacgatcgttgagatcatt
cgatgtctaaagttatccgaccccgaaatgattgcgaccggcatcactcgtccaaatctg
cgtttggatgtggttgcttgcgtcggcgagaaggagaaaaccagtgcgcttcgcgatttg
ttccaagccgaaagcgatctggacgcgaacgagcctgcaattgtttactgtgcgacgacc
aaaacctgcgaacgtctccgtgatgaactgagcgacttgccgatgccaacgttgtgctat
cacggacgaatgaaacagtcgctccgcagcgaatcgcaatctgctttcatggatgggcca
cctgccgtgatgttcgccaccaatgcgtttggtcttggaattgacaaacctgatatccgt
cgggtggttcactacgacctgccagggtcgctcgaggcatactaccaagaagccgggcgt
gctggccgagatggaagcgcggccgcttgtacactgttcttcgatcgagaagacatcggt
ttgcagaaaatgtttgccagcggtgcgatcgattcgtctcaactgatgaccgctcaccat
acgttggtcaagggaatcgagcggtggggcgatgacggcgacggcgtgtcacttaccgac
ctgaagaggattagtccgctcggtcggcaaacgcttaaacagtgtctccagcaactcgcc
gctcgtggctatgccgctcctgcaggccgtggacgctgggcgtgcctcctggataccatc
gatcacgccgtcaccgatggaatcgctgcggacgctcggatgcgttgcgaagaccgccga
atcgcaatcgaccagatggtcagctatgccgaatcgagcgagtgccgttggacgatccta
caaaagcactttgaaacgagttcggcgtctgaccaactctgtcgttgtggcaattgcggt
ggcgtagatgccgacgtggcatag
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