Rhizobium johnstonii: pRL120607
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Entry
pRL120607 CDS
T00402
Name
(GenBank) putative ATP-binding component of ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL120607
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120607
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
pRL120607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_16
AAA
AAA_22
AAA_25
AAA_29
nSTAND3
RsgA_GTPase
AAA_5
nSTAND1
ATP-synt_ab
NACHT
PRK
AAA_24
Mg_chelatase
NB-ARC
AAA_18
CbiA
RNA_helicase
IstB_IS21
MMR_HSR1
Sigma54_activat
Rad17
DUF87
TsaE
Zeta_toxin
CoaE
PhoH
Roc
AAA_19
RecA
Motif
Other DBs
NCBI-ProteinID:
CAK12317
RhizoBase:
pRL120607
UniProt:
Q1M3K7
LinkDB
All DBs
Position
pRL12:complement(659072..660727)
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AA seq
551 aa
AA seq
DB search
MSNFIEIRDLKVEATTDSGRRVEIIKGVSLDVAEGEIVALIGESGSGKTTIALTLMGHTR
AGCRISGGSVSVGGKDMVTLSEKQRAKVRGTEVAYVPQSAAAAFNPATSIMDQVIEVTRI
HQLMSPDQARARAVELFRALSLPDPETIGSRYPHQVSGGQLQRLAAAMALIGDPTLVIFD
EPTTALDVTTQIEVLRAFKSVMKKGGISGVYVSHDLAVVAQIADRIVVLKGGETQEAGTT
DEILNNAKHPYTRELLAAFEPKPRGAVGSAEPATAPLLRIEDLVAGYGQRQADGLPLVRA
VEHVSLKVEKGRNLGIIGESGCGKSTLARTIAGILPAAVGKIVFDGTELRRNARERSRDQ
LREMQIVFQYADTALNPAKSVEDILARPLVFYHGMDRKARNARIDQLLDMVRLPRNLRHR
RPGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVIDLLKELQRELGLSYIF
ISHDLSVVEAICDEIVVMYGGRKVEEITSSTVKAPQHPYSQLLFSSVPTLDPAWLDGLQQ
DPELVRAYCRH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttcatcgaaatccgtgacctgaaggtcgaggccaccaccgattccggccga
cgcgtcgaaatcatcaagggtgtcagcctcgatgttgccgagggcgagatcgtcgcgctg
atcggcgagagcggctcgggcaagacaaccatcgccctgacccttatgggccatacgcgt
gcgggctgtcgcatctccggcggcagcgtttcggtcggcggcaaggacatggtcacgctc
agcgagaagcagcgcgccaaggtgcgcggcaccgaagtcgcctatgtcccgcaatcggca
gctgccgccttcaacccggccacatcgatcatggaccaggtgatcgaagtcacccgtatt
caccagctgatgtcgccggaccaggcgcgcgcccgagccgtcgagctcttccgggcgctg
tccctgccggaccccgagacgatcggcagccggtatccccaccaggtttccggcggccag
ctgcagcgtctggccgctgccatggcgctgatcggcgacccgaccctcgtcatcttcgac
gagccgacgacggcgctcgacgtcacgacccagatcgaagtgctgcgcgccttcaagtcg
gtcatgaagaagggcggcatatcaggcgtttatgtctcccacgaccttgccgtcgtcgcg
cagatcgcggaccgcatcgtggtcctgaaaggcggggagacccaggaagccggcaccacg
gacgagatcctcaacaatgcgaagcacccctataccagggagctgctcgcagccttcgag
ccgaaaccgcgcggcgcagttggctccgccgaacccgcgacggctccactgctgaggatc
gaagatctggtcgcgggctatggacagcgccaggctgacggcctgccgctcgttcgcgcg
gtcgagcacgtgagcctgaaggtggaaaaaggccgcaatctcggcatcatcggcgagtcc
ggttgcggcaagtcgacgcttgcccggaccatcgccggcatcctgccggcggcagtcggc
aagatcgtcttcgacgggacggaactgcgccgcaacgcgcgcgaacgctcgcgcgatcaa
ttgcgcgagatgcagatcgtcttccaatatgccgataccgcactcaacccggcaaaatcg
gttgaggacatcctcgccaggcctctggtcttttaccacggcatggatcgaaaggcgcgg
aacgcccggattgatcaactgctcgacatggtgcgcctgccccgcaacctgcgccatcgc
cggccgggcgaactctcgggtgggcagaagcaacgcgtcaacttcgcgcgggcgctcgcc
gccgatccgaagctgatcctctgcgacgagattacctcggcgctcgacacggtggtcgcc
gccgcagtcatcgacctgctcaaggagttgcagcgcgaactcggcctctcctacatcttc
atcagccacgacctctcggtggtggaggcgatctgtgatgagatcgtcgtgatgtatgga
ggcaggaaggtcgaggaaatcacctcctcgacggtgaaggcgccgcagcacccctattcg
caactgctcttctcatcggtgccgacgctcgatccggcctggctcgacgggctccagcag
gatccggaactggtgcgggcctattgccggcactga
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integrated database retrieval system
