KEGG   Rhizobium lusitanum: HB780_15470
Entry
HB780_15470       CDS       T07787                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
rls  Rhizobium lusitanum
Pathway
rls02024  Quorum sensing
rls03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rls00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HB780_15470 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HB780_15470 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rls03019]
    HB780_15470 (hfq)
   03036 Chromosome and associated proteins [BR:rls03036]
    HB780_15470 (hfq)
Messenger RNA biogenesis [BR:rls03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HB780_15470 (hfq)
Chromosome and associated proteins [BR:rls03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HB780_15470 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: QND47122
LinkDB
Position
324054..324296
AA seq 80 aa
MAERSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPGQPMQMFESEEVAS
NT seq 243 nt   +upstreamnt  +downstreamnt
atggcggaacgttctcagaacttgcaggacctatttcttaatactgttcgcaagcaaaaa
atttcactcacaatcttcttgatcaatggcgtgaagctcacgggcgttgttacgtccttc
gacaatttctgcgtcctgctacgccgcgacggtcattcgcagcttgtttacaagcacgcg
atttcgaccatcatgccgggtcagcccatgcagatgttcgagagcgaagaagtcgcatcc
taa

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