Roseicyclus marinus: MACH21_17640
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Entry
MACH21_17640 CDS
T09703
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rmai
Roseicyclus marinus
Pathway
rmai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH21_17640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmai03019
]
MACH21_17640
03009 Ribosome biogenesis [BR:
rmai03009
]
MACH21_17640
Enzymes [BR:
rmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MACH21_17640
Messenger RNA biogenesis [BR:
rmai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MACH21_17640
Ribosome biogenesis [BR:
rmai03009
]
Prokaryotic type
rRNA processing factors
MACH21_17640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
UreE_C
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BDW85587
UniProt:
A0AA48KIA5
LinkDB
All DBs
Position
complement(1887869..1890478)
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AA seq
869 aa
AA seq
DB search
MLIDATHPEETRVVVADGHKVEEFDFESLNKRQLAGNIYLAKVTRVEPSLQAAFVDYGGN
RHGFLAFSEIHPDYYQIPVADREALLREEREYAEAMAEEAEEDAKPKRGRRPRRRKASDT
AAEAAGNDAVTTGTASGGPSGMDVVDLGDDEAEGDRLEGLSPMETVAETPVEEPEDAGAE
DAAQDHDHDHDHDHDHEGEGEAAPAAETVADDDTEEDIRPTRKPRPRKYKIQEVIKVRQI
MLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKEIAQEI
DVPQGAGLIIRTAGSQRTKTEIKRDYEYLQRQWEQIRDLTLRSIAPAPIYEEGDLIHRSI
RDLYTREIEEVLVEGEAGYRHAKDFMKMIMPSHAKNVKHYTDPTPLFAKHKVEGYLADMF
NPTVQLKSGGYIVIGITEALVAIDVNSGRATKEGSIEETALKTNLEAAEEVARQVRLRDL
AGLIVIDFIDMDERRNNLAVEKRLKDKLKTDRARIQVGRISAFGLLEMSRQRLRPGMLEA
TTQPCKHCHGTGLIRSDDSLALSILRQLEEEGPKGRAKEVKVTAPVAIVNYLMNEKREYL
AAIEARYGMAIRVEADPAMVPPDYRIERFKTATRRIAAVSPVVSMDAALMNDIDEDVVEV
EDIEVEEDEAQAVAAPAAARGEDEEQPKKKRRRRRGGRGRRKKTDEAGMEDGRAEGDDED
GEEDEDQGGEGDAPKAEPEAVAEPAPEPAPEAAVEAEVAAEAEPVAEAVTEEAPAEKPKR
TRAPRTRKTPAKTTAKTSKAKAEAVEAASEPVAEAEPAAAAPAEAAPEPAPAPEPEPVAE
AAPAAVEPAPAAAPDEPPKPKRRGWWLGS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgatgccacgcacccggaggaaacccgggtcgtcgtggcggacggacacaag
gtcgaggaattcgatttcgagtcgctgaacaagcggcaactggcaggaaacatctatctg
gcaaaggtcacgcgggtcgaaccctcgcttcaggccgcctttgtcgattacggcggaaac
cggcacgggttcctcgcgttttccgaaattcaccccgattactaccagatcccggtcgcg
gaccgcgaagcgctgctccgcgaggaacgcgaatacgccgaagccatggccgaagaggcc
gaggaagacgccaagcccaagcgcggccgcaggccccgccgccgcaaagcgtcggacacg
gctgctgaggccgcgggcaatgatgccgtgacgacgggcaccgcctcgggcgggccatcg
ggcatggatgtcgtcgatctgggcgatgacgaggccgagggcgacaggctcgaaggtctg
tctccgatggagacggtcgccgagaccccggtcgaggaacccgaagacgccggggcggag
gatgccgcgcaggatcatgaccatgatcacgatcacgatcatgatcacgagggtgagggc
gaggcagcccccgccgccgaaacggtcgccgatgacgacaccgaagaggacatccgcccg
acccgcaagccgcgcccccggaaatacaagatccaggaggtcatcaaggtccggcagatc
atgctggtgcaggtcgtcaaggaagagcgcggcaacaagggtgcagcgctcaccacctat
ctgagccttgcgggccgttattgcgtgctcatgcccaacacggcgcggggcggtggcatc
agccgcaagatcaccaatgccgccgaccgcaagaagctcaaggaaatcgcgcaggaaatc
gacgtcccgcagggtgcgggcctgatcatccgcacggcgggcagccagcgcaccaagacc
gagatcaagcgcgattacgaatacctgcagcgccagtgggaacagatccgcgatctgacg
ctgcgctccatcgcgccggccccgatctacgaggaaggcgacctgatccaccggtcgatc
cgcgatctttatacccgcgagatcgaggaggtcctggtggaaggcgaggcgggctatcgc
cacgccaaggacttcatgaagatgatcatgccgtcccacgccaagaacgtgaagcattac
accgaccccacgcccttgttcgccaagcacaaggtcgaggggtatctggccgacatgttc
aacccgaccgtgcagctgaagtcgggcggctatatcgtgatcggcatcaccgaggcgctg
gttgccatcgacgtgaactccggccgggccaccaaggaaggctcgatcgaggagacggcg
ctcaagaccaacctcgaggccgccgaggaagtggcgcgccaggtccgtctgcgcgacctt
gccggtctgatcgtcatcgatttcatcgacatggacgagcggcgcaacaaccttgccgtg
gaaaagcggctgaaggacaagctcaagaccgaccgcgcgcgcatccaggtgggccgcatc
tcggcctttggtcttctggaaatgtcgcgccagcgtctgcgccccggcatgctggaggcc
acgacccagccctgcaagcattgccatggcacggggctgatccgctccgatgacagcctt
gcgctgtccatcctgcgccagctggaggaagaggggccgaagggtcgcgccaaggaggtc
aaggtgacagcgcccgtcgccatcgtgaactacctgatgaacgaaaagcgcgaatacctg
gccgcgatcgaggcgcgctacggcatggcgataagggtcgaggccgaccccgccatggtg
ccgcccgattaccggatcgaacggttcaagaccgcgacacgccgcatcgcggcggtcagc
cccgtcgtgtccatggatgcggccctgatgaatgatatcgacgaggatgtcgtcgaggtc
gaggatatcgaggtcgaagaggacgaggcgcaggctgtcgccgcacccgccgccgcgcgt
ggcgaggacgaggagcagcccaagaagaagcgccgccgccgtcgcggtggccgtggccgt
cggaagaagacggacgaggccgggatggaagatgggcgcgccgaaggcgatgacgaggat
ggcgaggaggacgaggatcagggtggcgagggcgatgcgcctaaggccgagcccgaagcc
gtggccgaacctgcgccagagcccgcgccggaggcagctgtcgaagccgaggtcgcggca
gaggctgaaccggttgccgaagccgtgaccgaggaagcgcccgccgaaaagcccaagcgc
acccgcgcgcctcggacccgcaagacgcccgccaagacgaccgccaagacgtccaaggcc
aaggctgaggcggttgaggccgcatccgagccggttgcggaggctgagcctgctgcagcc
gcgcctgcggaagccgcgcccgagcccgctcctgcgccggaaccggagcctgtggccgaa
gccgccccggcggcggtggagcctgcacccgcagcagcccctgacgagccgccgaagccc
aagcggcgcggctggtggctgggcagctga
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